RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SPACA3Q8IXA5 215 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 OR6K3Q8NGY3 331 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 CCDC107Q8WV48 283 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF75AQ96N20 296 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 PRO1933Q9H354 126 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TMPRSS5Q9H3S3 457 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 G6PC2Q9NQR9 355 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TMEM38BQ9NVV0 291 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 PARPBPQ9NWS1 579 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 METTL1Q9UBP6 276 aaKnown RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 COLCA2A8K830 154 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 HSPB6O14558 160 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 RRP8O43159 456 aaKnown RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 CYB5AP00167 134 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF735P0CB33 412 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF708P17019 499 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 BMP5P22003 454 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 RBP2P50120 134 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 PLEKHN1Q494U1 663 aaPredicted RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 CD163Q86VB7 1156 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 OR5D14Q8NGL3 314 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 MISP3Q96FF7 219 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 SLC6A7Q99884 636 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF471Q9BX82 626 aaPredicted RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 OPA3Q9H6K4 179 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 MAP1AP78559 2803 aaPredicted RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF736B4DX44 427 aaPredicted RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 SLC34A2O95436 690 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 OR8U8P0C7N1 319 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 HOXC12P31275 282 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF93P35789 620 aaPredicted RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 UBE2NP61088 152 aaKnown RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 SSBP1Q04837 148 aaKnown RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 VWA1Q6PCB0 445 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 ADGRE4PQ86SQ3 457 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 MAFIPQ8WZ33 124 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 MARS2Q96GW9 593 aaKnown RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 SEC22AQ96IW7 307 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 CPAMD8Q8IZJ3 1885 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 SPRY1O43609 319 aaPredicted RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 FOXF2Q12947 444 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 DHRS2Q13268 280 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 LIN54Q6MZP7 749 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 C20orf196Q8IYI0 205 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 OR4D6Q8NGJ1 314 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 OR13C8Q8NGS7 320 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 NEU1Q99519 415 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 PKD1L2Q7Z442 2459 aa11.35□□□□□ -0.59
COL18A1-201ENST00000342220 SMG1Q96Q15 3661 aaKnown RBP11.35□□□□□ -0.59
COL18A1-201ENST00000342220 HPNP05981 417 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 UBCP0CG48 685 aaKnown RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 MOB3CQ70IA8 216 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 OR1F12Q8NHA8 337 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 WDR13Q9H1Z4 485 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 CNTD2Q9H8S5 307 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 NOP16Q9Y3C1 178 aaKnown RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 OR14I1A6ND48 311 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 ETV2O00321 342 aaPredicted RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 SRSF10O75494 262 aaKnown RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 NGFP01138 241 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 UBBP0CG47 229 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 GABRR1P24046 479 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 OR3A4PP47883 348 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 OR2B8PP59922 312 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 RPS27AP62979 156 aaKnown RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 UBA52P62987 128 aaKnown RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 ATXN7L3Q14CW9 347 aaPredicted RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 ALKBH6Q3KRA9 238 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 PRR30Q53SZ7 412 aaPredicted RBP11.34□□□□□ -0.59
COL18A1-201ENST00000342220 KRBOX4Q5JUW0 171 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 ETV3LQ6ZN32 361 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 REC114Q7Z4M0 266 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 RTN4RL2Q86UN3 420 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 CPT1CQ8TCG5 803 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 ADGRG7Q96K78 797 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 SELENOIQ9C0D9 397 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 FAM206AQ9NX38 181 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 WIPF3A6NGB9 483 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 LDLRAD4O15165 306 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 CYTIPO60759 359 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 MELTFP08582 738 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 FSTP19883 344 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 CD34P28906 385 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 PYY3Q5JQD4 70 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 UQCC3Q6UW78 93 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 GLIPR1L1Q6UWM5 242 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF561Q8N587 486 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 GVQW1Q8N7I0 195 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 WDYHV1Q96HA8 205 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 REEP6Q96HR9 211 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 VSIG4Q9Y279 399 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 TIMM10BQ9Y5J6 103 aa11.34□□□□□ -0.59
COL18A1-201ENST00000342220 KALRNO60229 2985 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms