RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TPRP12270 2363 aaKnown RBP10.83□□□□□ -0.67
LIMK1-201ENST00000336180 KMT2EQ8IZD2 1858 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 SNRPGP15A8MWD9 76 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 SLC33A1O00400 549 aaPredicted RBP10.83□□□□□ -0.68
LIMK1-201ENST00000336180 MELTFP08582 738 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 NFYAP23511 347 aaPredicted RBP10.83□□□□□ -0.68
LIMK1-201ENST00000336180 PLP2Q04941 152 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 PDZK1IP1Q13113 114 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 LIX1LQ8IVB5 337 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 C9orf106Q8NAJ2 232 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 Q96M66 194 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 CMSS1Q9BQ75 279 aaKnown RBP10.83□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF2Q9BSG1 426 aaPredicted RBP10.83□□□□□ -0.68
LIMK1-201ENST00000336180 GSKIPQ9P0R6 139 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 CHD8Q9HCK8 2581 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 HS3ST1O14792 307 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 COTL1Q14019 142 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 CNN3Q15417 329 aaKnown RBP10.83□□□□□ -0.68
LIMK1-201ENST00000336180 PHLDA2Q53GA4 152 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 ASCL5Q7RTU5 278 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 COQ8AQ8NI60 647 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 TMEM230Q96A57 120 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 TMEM45BQ96B21 275 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 GPR137Q96N19 417 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 BCO1Q9HAY6 547 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 NPTNQ9Y639 398 aa10.83□□□□□ -0.68
LIMK1-201ENST00000336180 TLN1Q9Y490 2541 aaKnown RBP10.83□□□□□ -0.68
LIMK1-201ENST00000336180 TRAV14DV4A0A0A6YYC5 116 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 A0A0A6YYH2 397 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF816-ZNF321PA0A0X1KG74 233 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 A6NJ64 397 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 RRP8O43159 456 aaKnown RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 RHBDL1O75783 438 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 PTAFRP25105 342 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF273Q14593 569 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 MEF2DQ14814 521 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 FAM74A1Q5RGS3 127 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 Q6ZPA2 131 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 RELL2Q8NC24 303 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 TERB2Q8NHR7 220 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 CCDC107Q8WV48 283 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 IP6K3Q96PC2 410 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 SLC25A21Q9BQT8 299 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 GIPP09681 153 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 COX5BP10606 129 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ZBTB25P24278 435 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 APLNRP35414 380 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 CACNA1DQ01668 2161 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 RPUSD3Q6P087 351 aaKnown RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 SLC22A25Q6T423 547 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 OSR2Q8N2R0 312 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 PRR18Q8N4B5 295 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 RDH5Q92781 318 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 EMG1Q92979 244 aaKnown RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 POM121L2Q96KW2 1035 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 OR2J1Q9GZK6 312 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 CLEC4MQ9H2X3 399 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ESRP2Q9H6T0 727 aaKnown RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 CHMP1AQ9HD42 196 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 MCRIP1C9JLW8 97 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 GSTP1P09211 210 aaKnown RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 CPN1P15169 458 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 IGHV1-2P23083 117 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 SERPINF1P36955 418 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ZBTB37Q5TC79 503 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 FBXW9Q5XUX1 488 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 SPICQ8N5J4 248 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ZSCAN4Q8NAM6 433 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 OR5T2Q8NGG2 359 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 PPP1R1CQ8WVI7 109 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 C1QTNF5Q9BXJ0 243 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 FAM117AQ9C073 453 aa10.82□□□□□ -0.68
LIMK1-201ENST00000336180 OPN3Q9H1Y3 402 aaPredicted RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 HEATR1Q9H583 2144 aaKnown RBP10.82□□□□□ -0.68
LIMK1-201ENST00000336180 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 PLSCR5A0PG75 271 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 RAP2BP61225 183 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 SEC61A1P61619 476 aaKnown RBP10.81□□□□□ -0.68
LIMK1-201ENST00000336180 AADACL3Q5VUY0 350 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 LYG2Q86SG7 212 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 OR1K1Q8NGR3 316 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 WBP1Q96G27 269 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 RIMS4Q9H426 269 aaPredicted RBP10.81□□□□□ -0.68
LIMK1-201ENST00000336180 KCNMB2Q9Y691 235 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 CD300LBA8K4G0 201 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 FOXC1Q12948 553 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 RNPS1Q15287 305 aaKnown RBP10.81□□□□□ -0.68
LIMK1-201ENST00000336180 ANKRD55Q3KP44 614 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 OR11L1Q8NGX0 322 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 MS4A7Q9GZW8 240 aaPredicted RBP10.81□□□□□ -0.68
LIMK1-201ENST00000336180 MFFQ9GZY8 342 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 ZDHHC11Q9H8X9 412 aa10.81□□□□□ -0.68
LIMK1-201ENST00000336180 DIDO1Q9BTC0 2240 aaKnown RBP10.81□□□□□ -0.68
LIMK1-201ENST00000336180 OR2A4O95047 310 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 ACTL6AO96019 429 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 CEBPDP49716 269 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms