RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 A0A1B0GW55 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 GEMIN2O14893 280 aaKnown RBP12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L2P0CJ85 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L3P0CJ86 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L4P0CJ87 422 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L5P0CJ88 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L6P0CJ89 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L7P0CJ90 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUSP1P28562 367 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DSCR9P59020 149 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 RPS27AP62979 156 aaKnown RBP12.64□□□□□ -0.39
CMC1-201ENST00000334841 ZNF146Q15072 292 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
CMC1-201ENST00000334841 FIP1L1Q6UN15 594 aaKnown RBP12.64□□□□□ -0.39
CMC1-201ENST00000334841 LRRC28Q86X40 367 aaPredicted RBP12.64□□□□□ -0.39
CMC1-201ENST00000334841 CD177Q8N6Q3 437 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 AP3S1Q92572 193 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 MRPS24Q96EL2 167 aaKnown RBP12.64□□□□□ -0.39
CMC1-201ENST00000334841 FOXC2Q99958 501 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 GAL3ST1Q99999 423 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 NICN1Q9BSH3 213 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 MRI1Q9BV20 369 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 PCDHB16Q9NRJ7 776 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 DUX4Q9UBX2 424 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 OR14J1Q9UGF5 321 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 NAV2Q8IVL1 2488 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 CSMD1Q96PZ7 3565 aa12.64□□□□□ -0.39
CMC1-201ENST00000334841 RFPL4AA6NLU0 287 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 RFPL4AL1F8VTS6 287 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 TNFRSF13BO14836 293 aaPredicted RBP12.63□□□□□ -0.39
CMC1-201ENST00000334841 HAND1O96004 215 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 RAB6AP20340 208 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 NR4A2P43354 598 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 RANBP1P43487 201 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 DYNC1I2Q13409 638 aaKnown RBP12.63□□□□□ -0.39
CMC1-201ENST00000334841 IL13RA2Q14627 380 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 PDCD1Q15116 288 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 TAF9Q16594 264 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 CNPY1Q3B7I2 92 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 TMEM155Q4W5P6 130 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 PRSS57Q6UWY2 283 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 LYPD2Q6UXB3 125 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 MUC20Q8N307 709 aaPredicted RBP12.63□□□□□ -0.39
CMC1-201ENST00000334841 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 TM2D1Q9BX74 207 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 NARFLQ9H6Q4 476 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 CTSZQ9UBR2 303 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
CMC1-201ENST00000334841 CEACAM18A8MTB9 384 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 SELLP14151 372 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 PRDX2P32119 198 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 ART1P52961 327 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 IKZF1Q13422 519 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 KCNJ8Q15842 424 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 Q6P435 159 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 ZNF788Q6ZQV5 615 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 DCDC5Q6ZRR9 648 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 RTN4RL2Q86UN3 420 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 FAM216BQ8N7L0 139 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 ACOT12Q8WYK0 555 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 PTX4Q96A99 478 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 CYYR1Q96J86 154 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 CCL13Q99616 98 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
CMC1-201ENST00000334841 RHBDL2Q9NX52 303 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 COMMD3Q9UBI1 195 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 RAB22AQ9UL26 194 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 ITPR2Q14571 2701 aa12.62□□□□□ -0.39
CMC1-201ENST00000334841 A0A096LNT2 108 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 IGHV4-61A0A0C4DH41 118 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 NKX6-3A6NJ46 265 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
CMC1-201ENST00000334841 SIRPB1O00241 398 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 HPGDSO60760 199 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 FCN3O75636 299 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 OR7C1O76099 320 aaPredicted RBP12.61□□□□□ -0.39
CMC1-201ENST00000334841 OR2H2O95918 312 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 EIF4EP06730 217 aaKnown RBP12.61□□□□□ -0.39
CMC1-201ENST00000334841 CPT2P23786 658 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 GABRR1P24046 479 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 GABRA2P47869 451 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 COL10A1Q03692 680 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 MPV17LQ2QL34 196 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 UBE2NLQ5JXB2 153 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
CMC1-201ENST00000334841 SHEQ5VZ18 495 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 SIGIRRQ6IA17 410 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 FAM89BQ8N5H3 189 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 WFDC11Q8NEX6 87 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 CLDND2Q8NHS1 167 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 SDSLQ96GA7 329 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 Q96MF0 132 aa12.61□□□□□ -0.39
CMC1-201ENST00000334841 URM1Q9BTM9 101 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms