RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZNF735P0CB33 412 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 CD81P60033 236 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 KRTDAPP60985 99 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 PLCXD2Q0VAA5 305 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 TAF9Q16594 264 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 TMEM240Q5SV17 173 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 MCHR2Q969V1 340 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 FAM71F1Q96KD3 344 aaPredicted RBP10.45□□□□□ -0.74
LIMK2-202ENST00000333611 VAMP8Q9BV40 100 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 NUDT9Q9BW91 350 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 MRPS18CQ9Y3D5 142 aaKnown RBP10.45□□□□□ -0.74
LIMK2-202ENST00000333611 TMED3Q9Y3Q3 217 aa10.45□□□□□ -0.74
LIMK2-202ENST00000333611 IGHV3-20A0A0C4DH32 117 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 FAM230AA0A1W2PPH8 454 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 TMEM150CB9EJG8 249 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 FOXS1O43638 330 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 SLC37A1P57057 533 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 ABCA11PQ4W5N1 156 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 PHLDA2Q53GA4 152 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 OR52N4Q8NGI2 321 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 FANCMQ8IYD8 2048 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 PCNX3Q9H6A9 2034 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 GTF3C1Q12789 2109 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 OR2J2O76002 312 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 ONECUT2O95948 504 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 CD55P08174 381 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 OR5G3P0C626 314 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 ASAH2BP0C7U1 165 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 GABREP78334 506 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 POU3F1Q03052 451 aaPredicted RBP10.44□□□□□ -0.74
LIMK2-202ENST00000333611 CHRFAM7AQ494W8 412 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 ASPHD2Q6ICH7 369 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 HLA-CQ95604 372 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 MRPL24Q96A35 216 aaKnown RBP10.44□□□□□ -0.74
LIMK2-202ENST00000333611 AQP10Q96PS8 301 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 PCGF1Q9BSM1 259 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 FOXQ1Q9C009 403 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 CNTD2Q9H8S5 307 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 OR52A1Q9UKL2 312 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 DOCK11Q5JSL3 2073 aa10.44□□□□□ -0.74
LIMK2-202ENST00000333611 PHF3Q92576 2039 aaKnown RBP10.44□□□□□ -0.74
LIMK2-202ENST00000333611 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.43□□□□□ -0.74
LIMK2-202ENST00000333611 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.43□□□□□ -0.74
LIMK2-202ENST00000333611 A0A1W2PQF6 199 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 NPIPA5E9PKD4 350 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 M0QZK8 103 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 TMEM127O75204 238 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 GGCTO75223 188 aaKnown RBP10.43□□□□□ -0.74
LIMK2-202ENST00000333611 ZNF708P17019 499 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 FBXW12Q6X9E4 464 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 VN1R1Q9GZP7 353 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 RNF150Q9ULK6 438 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 NPIPA1Q9UND3 350 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 SFT2D2O95562 160 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 CD1AP06126 327 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 GUSBP08236 651 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 RPL27P61353 136 aaKnown RBP10.43□□□□□ -0.74
LIMK2-202ENST00000333611 FZD2Q14332 565 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 NSDHLQ15738 373 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 PRSS8Q16651 343 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 TDRG1Q3Y452 100 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 KLHL24Q6TFL4 600 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 ZNF440Q8IYI8 595 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 C7orf61Q8IZ16 206 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 ELSPBP1Q96BH3 223 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 TECTBQ96PL2 329 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 NICN1Q9BSH3 213 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 SLC2A9Q9NRM0 540 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 PRR19A6NJB7 356 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 FAM157AC9JC47 383 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 H3BP45 60 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 H7BYZ3 331 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 GOSR1O95249 250 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 GCGP01275 180 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 EPHA1P21709 976 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 BMP5P22003 454 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 CDC34P49427 236 aaPredicted RBP10.43□□□□□ -0.74
LIMK2-202ENST00000333611 ZNF92Q03936 586 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 RTP5Q14D33 572 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 TMEM41BQ5BJD5 291 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 UNQ5815/PRO19632Q6UWF5 114 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 CALHM1Q8IU99 346 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 SLC26A1Q9H2B4 701 aa10.43□□□□□ -0.74
LIMK2-202ENST00000333611 MYOZ1Q9NP98 299 aaPredicted RBP10.43□□□□□ -0.74
LIMK2-202ENST00000333611 TMED7-TICAM2A0A0A6YYA0 188 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 A0A1W2PP11 408 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 TLCD2A6NGC4 264 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 RAB29O14966 203 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 TK1P04183 234 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 GLIPR1P48060 266 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 Q6ZN92 141 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 RNF144BQ7Z419 303 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 ZNF573Q86YE8 665 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 TMEM156Q8N614 296 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 EXD3Q8N9H8 876 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 LRRC75AQ8NAA5 344 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 RNF128Q8TEB7 428 aa10.42□□□□□ -0.74
LIMK2-202ENST00000333611 PGAM5Q96HS1 289 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms