RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TOMM40LQ969M1 308 aa21.26■□□□□ 0.99
SOX1-201ENST00000330949 TMEM131Q92545 1883 aa21.26■□□□□ 0.99
SOX1-201ENST00000330949 FAM24AA6NFZ4 105 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 OR4A8P0C604 315 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 ZNF728P0DKX0 622 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 CCKARP32238 428 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 PDLIM4P50479 330 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 OGFOD3Q6PK18 319 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 MRPL52Q86TS9 123 aaKnown RBP21.25■□□□□ 0.99
SOX1-201ENST00000330949 C7orf61Q8IZ16 206 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 CMTM1Q8IZ96 169 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 BLACEA4D250 179 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 HLA-DOBP13765 273 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 PGCP20142 388 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 HSF1Q00613 529 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 C1orf61Q13536 156 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 HERPUD1Q15011 391 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 BMFQ96LC9 184 aa21.25■□□□□ 0.99
SOX1-201ENST00000330949 PHF3Q92576 2039 aaKnown RBP21.24■□□□□ 0.99
SOX1-201ENST00000330949 OR4D5Q8NGN0 318 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 ANGPTL4Q9BY76 406 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 SDF2L1Q9HCN8 221 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 P4HTMQ9NXG6 502 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 IL17BQ9UHF5 180 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 ANXA10Q9UJ72 324 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 TMED7-TICAM2A0A0A6YYA0 188 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 A0A0J9YY10 115 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 NPIPA5E9PKD4 350 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 C5orf67F2Z3F1 127 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 C1orf194Q5T5A4 169 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 TEX38Q6PEX7 206 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 NPRL2Q8WTW4 380 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 ADOQ96SZ5 270 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 PLEKHF2Q9H8W4 249 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 NPIPA1Q9UND3 350 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 CLDN16Q9Y5I7 305 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 PPP5D1E7EU14 171 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 NPSP0C0P6 89 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 POLR2HP52434 150 aaKnown RBP21.24■□□□□ 0.99
SOX1-201ENST00000330949 MRPL41Q8IXM3 137 aaKnown RBP21.24■□□□□ 0.99
SOX1-201ENST00000330949 ASB10Q8WXI3 467 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 GAB2Q9UQC2 676 aa21.24■□□□□ 0.99
SOX1-201ENST00000330949 CLPSP04118 112 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 CST2P09228 141 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 FGF5P12034 268 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 NTSR1P30989 418 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 GALNSP34059 522 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 CARFQ8N187 725 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 SLC46A1Q96NT5 459 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 TBL1XR1Q9BZK7 514 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 RTN4RQ9BZR6 473 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 MCTS1Q9ULC4 181 aaKnown RBP21.23■□□□□ 0.99
SOX1-201ENST00000330949 IGSF23A1L1A6 192 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 OR3A1P47881 315 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 DAP3P51398 398 aaKnown RBP21.23■□□□□ 0.99
SOX1-201ENST00000330949 TGIF2LYQ8IUE0 185 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 PRR18Q8N4B5 295 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 SSC4DQ8WTU2 575 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 TMEM171Q8WVE6 324 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 MSI2Q96DH6 328 aaKnown RBP21.23■□□□□ 0.99
SOX1-201ENST00000330949 THOC3Q96J01 351 aaKnown RBP21.23■□□□□ 0.99
SOX1-201ENST00000330949 KCNK17Q96T54 332 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 NXF5Q9H1B4 397 aaKnown RBP21.23■□□□□ 0.99
SOX1-201ENST00000330949 FAM60AQ9NP50 221 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 GPR173Q9NS66 373 aa21.23■□□□□ 0.99
SOX1-201ENST00000330949 IGKV1D-43A0A0B4J1Z2 117 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 TRAV1-1A0A0B4J248 108 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 MMP7P09237 267 aaPredicted RBP21.22■□□□□ 0.99
SOX1-201ENST00000330949 TMEM225BP0DP42 221 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 SLC37A1P57057 533 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 PMS2P11Q13670 270 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 ZNF573Q86YE8 665 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 SLC38A9Q8NBW4 561 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 OR10S1Q8NGN2 331 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 C11orf40Q8WZ69 217 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 LRFN1Q9P244 771 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 GNG13Q9P2W3 67 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 KIR2DL5BA0A0G2JN68 375 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 KIR2DL5BA0A0G2JPC4 375 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 OMGP23515 440 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 ZFP36L1Q07352 338 aaKnown RBP21.22■□□□□ 0.99
SOX1-201ENST00000330949 NKAIN1Q4KMZ8 207 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 ZNF66Q6ZN08 573 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 KIR2DL5AQ8N109 375 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 TM2D1Q9BX74 207 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 CALHM2Q9HA72 323 aa21.22■□□□□ 0.99
SOX1-201ENST00000330949 CISD1Q9NZ45 108 aaKnown RBP21.22■□□□□ 0.99
SOX1-201ENST00000330949 MRPS18CQ9Y3D5 142 aaKnown RBP21.22■□□□□ 0.99
SOX1-201ENST00000330949 A0A1W2PQF6 199 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 TSPO2Q5TGU0 170 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 FAM185AQ8N0U4 392 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 OR5D18Q8NGL1 313 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 OR5C1Q8NGR4 320 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 FAM71F1Q96KD3 344 aaPredicted RBP21.21■□□□□ 0.99
SOX1-201ENST00000330949 PYGO2Q9BRQ0 406 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 C11orf1Q9H5F2 150 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 NECAP2Q9NVZ3 263 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 ETV2O00321 342 aaPredicted RBP21.21■□□□□ 0.99
SOX1-201ENST00000330949 THEGLP0DJG4 465 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 CEACAM1P13688 526 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms