RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 PIGMQ9H3S5 423 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 NAA60Q9H7X0 242 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 C12orf4Q9NQ89 552 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 GLS2Q9UI32 602 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 TUBD1Q9UJT1 453 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 NME2P1O60361 137 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 OR7C1O76099 320 aaPredicted RBP12.54□□□□□ -0.4
TPM3-206ENST00000330188 TNFSF15O95150 251 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 NME2P22392 152 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 FCGR2CP31995 323 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 FXYD4P59646 89 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 TMEM187Q14656 261 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 NUFIP2Q7Z417 695 aaKnown RBP12.54□□□□□ -0.4
TPM3-206ENST00000330188 TMED6Q8WW62 240 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 HPSE2Q8WWQ2 592 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 MARC2Q969Z3 335 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 GALNT14Q96FL9 552 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 POM121Q96HA1 1249 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 KLF13Q9Y2Y9 288 aaPredicted RBP12.54□□□□□ -0.4
TPM3-206ENST00000330188 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 ZNF407Q9C0G0 2248 aa12.54□□□□□ -0.4
TPM3-206ENST00000330188 SIGLEC5O15389 551 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 IFNA21P01568 189 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 HKR1P10072 659 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 CD79AP11912 226 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 BCL3P20749 454 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 SPEM2Q0P670 501 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
TPM3-206ENST00000330188 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 FOXRED2Q8IWF2 684 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
TPM3-206ENST00000330188 RTN4IP1Q8WWV3 396 aaPredicted RBP12.53□□□□□ -0.4
TPM3-206ENST00000330188 APOBEC3DQ96AK3 386 aaPredicted RBP12.53□□□□□ -0.4
TPM3-206ENST00000330188 MOB3AQ96BX8 217 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 IP6K3Q96PC2 410 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 ZNF442Q9H7R0 627 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 KCNIP3Q9Y2W7 256 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 STARD10Q9Y365 291 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 LIPGQ9Y5X9 500 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 RAB19A4D1S5 217 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 APOC3P02656 99 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 RAB1AP62820 205 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
TPM3-206ENST00000330188 SP6Q3SY56 376 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 ABCA11PQ4W5N1 156 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 SLAMF9Q96A28 289 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 FER1L6-AS2Q96M78 137 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 LDAHQ9H6V9 325 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 R4GN57 208 aa12.53□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A10PA6NDY2 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A18PA6NE21 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A16PA6NEW6 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A20PA6NIJ5 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A8PA6NJQ4 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A7PA6NKC0 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A22PA8MWA6 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A12PA8MX19 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A5PA8MXJ8 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A23PA8MXZ1 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 BET1O15155 118 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 DEDDO75618 318 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 CST4P01036 141 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 NGFP01138 241 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A15PP0C7V4 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A13PP0C7W8 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A14PP0C7W9 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM90A24PP0C7X0 464 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 FAM157CP0CG43 387 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 HAAOP46952 286 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 GPM6AP51674 278 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 UCP3P55916 312 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.4
TPM3-206ENST00000330188 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 PHLDA2Q53GA4 152 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 UQCC3Q6UW78 93 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 ZDHHC23Q8IYP9 409 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 OR2S2Q9NQN1 319 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 SLC2A9Q9NRM0 540 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.4
TPM3-206ENST00000330188 DNAJC13O75165 2243 aa12.52□□□□□ -0.4
TPM3-206ENST00000330188 KLRC4-KLRK1H3BQV0 150 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 TAAR5O14804 337 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 ARR3P36575 388 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 GLP1RP43220 463 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 OR2A2Q6IF42 318 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 MCEMP1Q8IX19 187 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 SAXO1Q8IYX7 474 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
TPM3-206ENST00000330188 EXTL1Q92935 676 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms