RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR5P3Q8WZ94 311 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 CMBLQ96DG6 245 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 SEH1LQ96EE3 360 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 RTL8AQ9BWD3 113 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 PKIBQ9C010 78 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 OR51B6Q9H340 312 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 PLK3Q9H4B4 646 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 HSF4Q9ULV5 492 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 NUBP2Q9Y5Y2 271 aa13.95□□□□□ -0.18
PDLIM1-201ENST00000329399 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 LINC00854A0A1B0GVQ3 168 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 RCVRNP35243 200 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 TAS2R19P59542 299 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 ERVS71-1P61550 626 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 OR10K2Q6IF99 312 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 BIVMQ86UB2 503 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 CHST4Q8NCG5 386 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 MARS2Q96GW9 593 aaKnown RBP13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 NKIRAS2Q9NYR9 191 aa13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 MYEF2Q9P2K5 600 aaKnown RBP13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 NSD1Q96L73 2696 aaPredicted RBP13.94□□□□□ -0.18
PDLIM1-201ENST00000329399 SONP18583 2426 aaKnown RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 TMEM210A6NLX4 147 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 AKAIN1P0CW23 69 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 HIST1H1DP16402 221 aaKnown RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 GCH1P30793 250 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 PLA1AQ53H76 456 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 NHLRC3Q5JS37 347 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 Q6ZTK2 550 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 LINC00596Q86U02 117 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 TMEM104Q8NE00 496 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 OR51F2Q8NH61 342 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 SLC25A40Q8TBP6 338 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 RNF170Q96K19 258 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 Q96M66 194 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 MRPL37Q9BZE1 423 aaKnown RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 OR2J1Q9GZK6 312 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 KCNK15Q9H427 330 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 ELL3Q9HB65 397 aaPredicted RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 HRASLSQ9HDD0 168 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 KLK11Q9UBX7 282 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 ANK3Q12955 4377 aaKnown RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 hCG_2014768A0A024R1R8 64 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 IGKV1-27A0A075B6S5 117 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 H7C1Q1 480 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 SSX4O60224 188 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 DHFRP00374 187 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 ACAA1P09110 424 aaPredicted RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 SERPINA2P20848 420 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 IL24Q13007 206 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 MEF2DQ14814 521 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 PCGF3Q3KNV8 242 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 FAM76BQ5HYJ3 339 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 TMEM255AQ5JRV8 349 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 C1QL2Q7Z5L3 287 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 Q8IYB0 196 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 OSR2Q8N2R0 312 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 MAPK1IP1LQ8NDC0 245 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 KLF14Q8TD94 323 aaPredicted RBP13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 SELENOIQ9C0D9 397 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 POFUT1Q9H488 388 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 ZNF442Q9H7R0 627 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 GPR160Q9UJ42 338 aa13.93□□□□□ -0.18
PDLIM1-201ENST00000329399 ABCA1O95477 2261 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 FOXI3A8MTJ6 420 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 ZNF732B4DXR9 585 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 HTR3BO95264 441 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 TRAPPC2P0DI81 140 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 TRAPPC2BP0DI82 140 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 SPNP16150 400 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 MPZP25189 248 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 GLRXP35754 106 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 GNG2P59768 71 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 ZMYND11Q15326 602 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 EFNB3Q15768 340 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 CLEC12BQ2HXU8 276 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 ACTBL2Q562R1 376 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 OR2T2Q6IF00 324 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 BTN2A1Q7KYR7 527 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 OR8G5Q8NG78 346 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 OR5D18Q8NGL1 313 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 OR8S1Q8NH09 359 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 HPSE2Q8WWQ2 592 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 NEDD4LQ96PU5 975 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 SYT3Q9BQG1 590 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 OCSTAMPQ9BR26 566 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 BANF2Q9H503 90 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 TMEM100Q9NV29 134 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 NLKQ9UBE8 527 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 POLDIP2Q9Y2S7 368 aa13.92□□□□□ -0.18
PDLIM1-201ENST00000329399 A0A1B0GWJ7 208 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 MEIOCA2RUB1 952 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 LRP5LA4QPB2 252 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 B9A039 149 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 MFNGO00587 321 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 SMAD7O15105 426 aaKnown RBP13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 TCRBP04435 133 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 NAT1P18440 290 aa13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 BLVRBP30043 206 aaPredicted RBP13.91□□□□□ -0.18
PDLIM1-201ENST00000329399 SRP9P49458 86 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms