RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SPTBN2O15020 2390 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CEP250Q9BV73 2442 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 MGAQ8IWI9 3026 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 TMEM8BA6NDV4 472 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 MPTX1A8MV57 137 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 LEUTXA8MZ59 168 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 SS18L1O75177 396 aaPredicted RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 SPDEFO95238 335 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CST4P01036 141 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CELA3BP08861 270 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CEACAM1P13688 526 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 FUT3P21217 361 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 DTYMKP23919 212 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 UBE2NP61088 152 aaKnown RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 SRSF4Q08170 494 aaKnown RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 TSC22D1Q15714 1073 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 ANKRD55Q3KP44 614 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CLLU1Q5K131 121 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 OR2T2Q6IF00 324 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 TFAP2EQ6VUC0 442 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 MYPOPQ86VE0 399 aaPredicted RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 LIME1Q9H400 295 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 MTCH1Q9NZJ7 389 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CLCF1Q9UBD9 225 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 C14orf166Q9Y224 244 aaKnown RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 KCNMB2Q9Y691 235 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 ANKRD30BLA7E2S9 258 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 HSPB6O14558 160 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 KCNAB3O43448 404 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 IGHV1-2P23083 117 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 DUSP1P28562 367 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 IDH3GP51553 393 aaPredicted RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 DAZAP2Q15038 168 aaPredicted RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 SURF2Q15527 256 aaPredicted RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 NHLRC3Q5JS37 347 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 HAGHLQ6PII5 290 aaPredicted RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 SLC22A25Q6T423 547 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 IGF2-ASQ6U949 168 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 DPPA2Q7Z7J5 298 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 OR5L1Q8NGL2 311 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 COQ8AQ8NI60 647 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 THAP6Q8TBB0 222 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 TOMM40LQ969M1 308 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 CCDC120Q96HB5 630 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 C1QTNF6Q9BXI9 259 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 WDR13Q9H1Z4 485 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 METTL8Q9H825 291 aaKnown RBP6.5□□□□□ -1.37
IFT88-201ENST00000319980 C12orf4Q9NQ89 552 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 NECAP2Q9NVZ3 263 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 IL36RNQ9UBH0 155 aa6.5□□□□□ -1.37
IFT88-201ENST00000319980 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 RRP8O43159 456 aaKnown RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 SYNGR1O43759 233 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 RPS2P15880 293 aaKnown RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 CA6P23280 308 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 FXYD4P59646 89 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 TBC1D28Q2M2D7 210 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 ESCO2Q56NI9 601 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 ZNF660Q6AZW8 331 aaPredicted RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 TMEM65Q6PI78 240 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 OR5A2Q8NGI9 324 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 MARS2Q96GW9 593 aaKnown RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 ZNF75AQ96N20 296 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 OPA3Q9H6K4 179 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 CHMP1AQ9HD42 196 aaPredicted RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 GLRX2Q9NS18 164 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 TNFSF18Q9UNG2 199 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 SVILO95425 2214 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 TEX13DA0A0J9YY54 714 aaPredicted RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 MED19A0JLT2 244 aaPredicted RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 ZNF891A8MT65 544 aaPredicted RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 TRAPPC2LH3BP13 241 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 CRHP06850 196 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 HOXB5P09067 269 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 SLC25A4P12235 298 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 PSMB6P28072 239 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 IGFBP7Q16270 282 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 FAM219AQ8IW50 185 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 MKXQ8IYA7 352 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 OR5P3Q8WZ94 311 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 SARAFQ96BY9 339 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 MBD2Q9UBB5 411 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 ARID1AO14497 2285 aa6.49□□□□□ -1.37
IFT88-201ENST00000319980 DSPP15924 2871 aaKnown RBP6.49□□□□□ -1.37
IFT88-201ENST00000319980 A0A0D9SG52 128 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 AQP7O14520 342 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 ZNF14P17017 642 aaPredicted RBP6.48□□□□□ -1.37
IFT88-201ENST00000319980 FCGR2CP31995 323 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 FGF12P61328 243 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 CYCSP99999 105 aaKnown RBP6.48□□□□□ -1.37
IFT88-201ENST00000319980 IKZF1Q13422 519 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 VWA1Q6PCB0 445 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 DHRS11Q6UWP2 260 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 Q6ZPA2 131 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 Q6ZT83 130 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 SLC51BQ86UW2 128 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 TMEM200AQ86VY9 491 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 C9orf106Q8NAJ2 232 aa6.48□□□□□ -1.37
IFT88-201ENST00000319980 INO80EQ8NBZ0 244 aaPredicted RBP6.48□□□□□ -1.37
IFT88-201ENST00000319980 Q8NFD4 153 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms