RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SPIN3Q5JUX0 258 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 ZNF676Q8N7Q3 588 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 OR13C3Q8NGS6 347 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 FOXRED1Q96CU9 486 aaPredicted RBP14.42□□□□□ -0.1
TPM1-203ENST00000317516 MALSU1Q96EH3 234 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 C4orf36Q96KX1 117 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 ZNF714Q96N38 554 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 OPALINQ96PE5 141 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 PCDHGB5Q9Y5G0 923 aa14.42□□□□□ -0.1
TPM1-203ENST00000317516 IGKV1-9A0A0C4DH69 117 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 FAM90A8PA6NJQ4 464 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 SH2D1BO14796 132 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 IGHV1-8P0DP01 117 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 NPBWR2P48146 333 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 NANOS3P60323 173 aaKnown RBP14.41□□□□□ -0.1
TPM1-203ENST00000317516 MRPL28Q13084 256 aaKnown RBP14.41□□□□□ -0.1
TPM1-203ENST00000317516 ALKBH1Q13686 389 aaKnown RBP14.41□□□□□ -0.1
TPM1-203ENST00000317516 EDDM3AQ14507 147 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 ZBTB49Q6ZSB9 765 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 SYS1Q8N2H4 156 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 OR11H6Q8NGC7 330 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 OR2T6Q8NHC8 308 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 LGALS12Q96DT0 336 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 PELI1Q96FA3 418 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 CDCA4Q9BXL8 241 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 NPFFR1Q9GZQ6 430 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 RANBP3Q9H6Z4 567 aaPredicted RBP14.41□□□□□ -0.1
TPM1-203ENST00000317516 RHOFQ9HBH0 211 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 ABCB10Q9NRK6 738 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 INPP5EQ9NRR6 644 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 RBFOX1Q9NWB1 397 aaKnown RBP14.41□□□□□ -0.1
TPM1-203ENST00000317516 LINC00312Q9Y6C7 94 aa14.41□□□□□ -0.1
TPM1-203ENST00000317516 TMEM82A0PJX8 343 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 FUOMA2VDF0 154 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 VGLL3A8MV65 326 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 H3BUI4 141 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 MGST3O14880 152 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 MT-ND2P03891 347 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 PRKACAP17612 351 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 BCL3P20749 454 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 ZNF91Q05481 1191 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 DYNC1I2Q13409 638 aaKnown RBP14.4□□□□□ -0.1
TPM1-203ENST00000317516 Q6ZTK2 550 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 LHFPL3Q86UP9 236 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 OR5D14Q8NGL3 314 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 RHOXF1Q8NHV9 184 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 HAVCR2Q8TDQ0 301 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 ALG8Q9BVK2 526 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 PITPNC1Q9UKF7 332 aa14.4□□□□□ -0.1
TPM1-203ENST00000317516 OR4C45A6NMZ5 311 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 EBAG9O00559 213 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 DBTP11182 482 aaKnown RBP14.39□□□□□ -0.11
TPM1-203ENST00000317516 GABRB1P18505 474 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 DUSP1P28562 367 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 ERP29P30040 261 aaKnown RBP14.39□□□□□ -0.11
TPM1-203ENST00000317516 DEFA6Q01524 100 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 RAB40BQ12829 278 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 C2orf68Q2NKX9 166 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 ZNF626Q68DY1 528 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 LHFPL4Q7Z7J7 247 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 SERPINA12Q8IW75 414 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 OR52N4Q8NGI2 321 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 RPS4Y2Q8TD47 263 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 CHST6Q9GZX3 395 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 COMMD4Q9H0A8 199 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 ZCCHC4Q9H5U6 513 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 S100A14Q9HCY8 104 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 HMG20AQ9NP66 347 aa14.39□□□□□ -0.11
TPM1-203ENST00000317516 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
TPM1-203ENST00000317516 RPL36Q9Y3U8 105 aaKnown RBP14.39□□□□□ -0.11
TPM1-203ENST00000317516 TRRAPQ9Y4A5 3859 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 LOC100130705A0A1B0GUX0 176 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 MEX3AA1L020 520 aaKnown RBP14.38□□□□□ -0.11
TPM1-203ENST00000317516 TMEM212A6NML5 194 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 ODF3BA8MYP8 253 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 KCNAB3O43448 404 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 PSPNO60542 156 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 ALX3O95076 343 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 IGHA1P01876 353 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 CCDC159P0C7I6 412 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 PAX6P26367 422 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 GBX2P52951 348 aaPredicted RBP14.38□□□□□ -0.11
TPM1-203ENST00000317516 HERPUD1Q15011 391 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 FAM189A2Q15884 450 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 SSX2Q16385 188 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 KLHL22Q53GT1 634 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 CRIP3Q6Q6R5 217 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 TRAPPC6BQ86SZ2 158 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 SAXO1Q8IYX7 474 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 OR51A4Q8NGJ6 313 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 OR13C9Q8NGT0 318 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 PIFOQ8TCI5 191 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 IL36RNQ9UBH0 155 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 AASSQ9UDR5 926 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 GSTK1Q9Y2Q3 226 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 UBE2J1Q9Y385 318 aaPredicted RBP14.38□□□□□ -0.11
TPM1-203ENST00000317516 SESN1Q9Y6P5 492 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 MEGF8Q7Z7M0 2845 aa14.38□□□□□ -0.11
TPM1-203ENST00000317516 KDM4BO94953 1096 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 CALCBP10092 127 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms