RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 NOXO1Q8NFA2 376 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 OR5C1Q8NGR4 320 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 CLDND2Q8NHS1 167 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 VWCEQ96DN2 955 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 GAS2L1Q99501 681 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 CALHM2Q9HA72 323 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 WFDC1Q9HC57 220 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 IL23AQ9NPF7 189 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 HS3ST3B1Q9Y662 390 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 A0A0A6YYD4 124 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF727A8MUV8 499 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 RNF224P0DH78 156 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 PNLIPP16233 465 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 HBG1P69891 147 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 HBG2P69892 147 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 RPL19P84098 196 aaKnown RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SLC25A47Q6Q0C1 308 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 Q6ZSR3 168 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 OR1N1Q8NGS0 311 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SPTSSAQ969W0 71 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 C18orf12Q96KH6 178 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 TECTBQ96PL2 329 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SPACA5Q96QH8 159 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ATP5SQ99766 215 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SDF2L1Q9HCN8 221 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 PRR13Q9NZ81 148 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 IL36GQ9NZH8 169 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 LHFPL6Q9Y693 200 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SPTY2D1-AS1A0A0U1RR47 76 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 PDCD6O75340 191 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SLC25A6P12236 298 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SELLP14151 372 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ICAM4Q14773 271 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 OR1P1Q8NH06 330 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF721Q8TF20 911 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 MRGPRX1Q96LB2 322 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 OXGR1Q96P68 337 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 IGKV1-9A0A0C4DH69 117 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1W2PP11 408 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 CYTIPO60759 359 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 CXCL1P09341 107 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 LINC00271P0C7V0 271 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 NSDHLQ15738 373 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 BSXQ3C1V8 233 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF441Q8N8Z8 693 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 GMPPAQ96IJ6 420 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 DDA1Q9BW61 102 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 F5P12259 2224 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TGIF2-C20orf24A0A0A6YYL0 155 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TRAF3IP2O43734 574 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 HLA-HP01893 362 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TYMSP04818 313 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 GABRA4P48169 554 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 CCR5P51681 352 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 LBX1P52954 281 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 EXT1Q16394 746 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 KCNIP4Q6PIL6 250 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 Q6ZS49 121 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 Q6ZSR6 202 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 FOXQ1Q9C009 403 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 WWTR1Q9GZV5 400 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 LHX6Q9UPM6 363 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF705GA8MUZ8 300 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TRDCB7Z8K6 153 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 HLA-DOBP13765 273 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 FUT3P21217 361 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 EFNA3P52797 238 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 FBXW4P57775 412 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ERV3-1Q14264 604 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM241Q24JQ0 296 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF787Q6DD87 383 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ASCL4Q6XD76 172 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TGIF2LXQ8IUE1 241 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 PRR22Q8IZ63 422 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 CISD2Q8N5K1 135 aaKnown RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 IL22RA1Q8N6P7 574 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ZFP62Q8NB50 900 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ABHD5Q8WTS1 349 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ANAPC16Q96DE5 110 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 SNX22Q96L94 193 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TXNDC17Q9BRA2 123 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 POLR2AP24928 1970 aaKnown RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 VENTXO95231 258 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 CNOT4O95628 575 aaKnown RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 UCP1P25874 307 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 NPBWR2P48146 333 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 OTPQ5XKR4 325 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 C6orf201Q7Z4U5 140 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 OR5D18Q8NGL1 313 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 RHOVQ96L33 236 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 SLC7A11Q9UPY5 501 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 WASF3Q9UPY6 502 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 C3orf85A0A1B0GTC6 90 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 MPPED1O15442 326 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 MBP02144 154 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 PGA4P0DJD7 388 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 PGA5P0DJD9 388 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ERVFC1-1P60608 527 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms