RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SLC35B3Q9H1N7 401 aa14.97□□□□□ -0.01
SCAMP4-201ENST00000316097 WFDC1Q9HC57 220 aa14.97□□□□□ -0.01
SCAMP4-201ENST00000316097 PUS1Q9Y606 427 aaKnown RBP eCLIP14.97□□□□□ -0.01
SCAMP4-201ENST00000316097 IGHEP01854 428 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 HPNP05981 417 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SEC11BP0C7V7 166 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 BLVRBP30043 206 aaPredicted RBP14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 UCP2P55851 309 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 BIDP55957 195 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 RPS23P62266 143 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SLC35A1P78382 337 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 PYY3Q5JQD4 70 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 PIP4P1Q86T03 277 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SULF2Q8IWU5 870 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SEMA6DQ8NFY4 1073 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SH3BGRL3Q9H299 93 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SH2D2AQ9NP31 389 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 ZNF319Q9P2F9 582 aa14.96□□□□□ -0.01
SCAMP4-201ENST00000316097 SURF2Q15527 256 aaPredicted RBP14.96□□□□□ -0.02
SCAMP4-201ENST00000316097 CDPF1Q6NVV7 123 aa14.96□□□□□ -0.02
SCAMP4-201ENST00000316097 NPRL2Q8WTW4 380 aa14.96□□□□□ -0.02
SCAMP4-201ENST00000316097 ZNF2Q9BSG1 426 aaPredicted RBP14.96□□□□□ -0.02
SCAMP4-201ENST00000316097 PLEKHA2Q9HB19 425 aa14.96□□□□□ -0.02
SCAMP4-201ENST00000316097 IGKV1D-8A0A087WSZ0 117 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 BORCS7-ASMTA0A0B4J1R7 106 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 ETV2O00321 342 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 XRCC2O43543 280 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 ZIC3O60481 467 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 RFPL3SP0C7P2 107 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 FTH1P19P0C7X4 201 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 RAET1LQ5VY80 246 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 ARV1Q9H2C2 271 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 CHST11Q9NPF2 352 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 HDGFL3Q9Y3E1 203 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 IGHV3-15A0A0B4J1V0 119 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 LY86O95711 162 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 HOXA5P20719 270 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 PPP1CCP36873 323 aaKnown RBP14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 ZNF121P58317 390 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 SLC25A53Q5H9E4 307 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 HEPN1Q6WQI6 88 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 HIST2H3AQ71DI3 136 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 C1QL2Q7Z5L3 287 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 C1QL4Q86Z23 238 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 IL22RA1Q8N6P7 574 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 HSD17B11Q8NBQ5 300 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 PECRQ9BY49 303 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 SERINC1Q9NRX5 453 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 DEPPQ9NTK1 212 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 TREM2Q9NZC2 230 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 MMP24Q9Y5R2 645 aa14.95□□□□□ -0.02
SCAMP4-201ENST00000316097 IFITM10A6NMD0 228 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 PRR33A8MZF0 331 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 SLC34A2O95436 690 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 DIRAS3O95661 229 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 MBPP02686 304 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 LIFP15018 202 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 ZNF17P17021 662 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 GPX4P36969 197 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 RAB1AP62820 205 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 CHAF1BQ13112 559 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 YRDCQ86U90 279 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 PBDC1Q9BVG4 233 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 B3GAT1Q9P2W7 334 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 LHFPL6Q9Y693 200 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 DOCK10Q96BY6 2186 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 IGKV1-9A0A0C4DH69 117 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 TERTO14746 1132 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 SERPINA7P05543 415 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 SERPINA2P20848 420 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 CHATP28329 748 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 ZNF84P51523 738 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 NDUFA6P56556 154 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 ZP4Q12836 540 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 SRSF6Q13247 344 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 CLINT1Q14677 625 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 FAM189A2Q15884 450 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 PLA2G3Q9NZ20 509 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 KLHL13Q9P2N7 655 aa14.94□□□□□ -0.02
SCAMP4-201ENST00000316097 MUC6Q6W4X9 2439 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 PINLYPA6NC86 204 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 E5RGE8 158 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 CD63P08962 238 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 ITGA3P26006 1051 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 CDAP32320 146 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 P2RY1P47900 373 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 DEFA6Q01524 100 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 EIF3IQ13347 325 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 SP6Q3SY56 376 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 CARD17Q5XLA6 110 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 LINC00696Q6ZRV3 163 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 ZNF383Q8NA42 475 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 FAM213BQ8TBF2 198 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 GINS3Q9BRX5 216 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 HES7Q9BYE0 225 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 MOB1AQ9H8S9 216 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 NSG2Q9Y328 171 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 DHRS7CA6NNS2 312 aa14.93□□□□□ -0.02
SCAMP4-201ENST00000316097 S100A2P29034 98 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms