RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 XRCC3O43542 346 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF708P17019 499 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 RPS27AP62979 156 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 UBA52P62987 128 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 LRRTM1Q86UE6 522 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 RDH10Q8IZV5 341 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 C9orf62Q8N4C0 152 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 OR5D18Q8NGL1 313 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 BCL2L2Q92843 193 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 KISS1RQ969F8 398 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 CLCC1Q96S66 551 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 SPXQ9BT56 116 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 NDUFAF3Q9BU61 184 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 C20orf24Q9BUV8 137 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 EMC6Q9BV81 110 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZDHHC11Q9H8X9 412 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 CBLN4Q9NTU7 201 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ANKRD10Q9NXR5 420 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 METTL1Q9UBP6 276 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 MAP1BP46821 2468 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF736B4DX44 427 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 IFNL4K9M1U5 179 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 AMY2BP19961 511 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 RIPPLY3P57055 190 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF121P58317 390 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 RAP2BP61225 183 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 LINC01590Q5TEZ4 76 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 VASH2Q86V25 355 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ST6GALNAC3Q8NDV1 305 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 BHLHE23Q8NDY6 225 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 LGALS14Q8TCE9 139 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ABHD3Q8WU67 409 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FGGYQ96C11 551 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 TTTY10Q9BZA0 68 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ISG20L2Q9H9L3 353 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 MTCH1Q9NZJ7 389 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FOXD3Q9UJU5 478 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A10PA6NDY2 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A18PA6NE21 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A16PA6NEW6 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A20PA6NIJ5 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A8PA6NJQ4 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A7PA6NKC0 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A22PA8MWA6 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A12PA8MX19 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A5PA8MXJ8 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A23PA8MXZ1 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ARPC1BO15143 372 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF207O43670 478 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 HYAL3O43820 417 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 OR7C2O60412 319 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A15PP0C7V4 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A13PP0C7W8 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A14PP0C7W9 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FAM90A24PP0C7X0 464 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 MTCP1P56278 107 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 UBE2MP61081 183 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF718Q3SXZ3 478 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 WDR38Q5JTN6 314 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 SPINK14Q6IE38 97 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 LAIR2Q6ISS4 152 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 STEAP1BQ6NZ63 245 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 MOB3CQ70IA8 216 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 LSRQ86X29 649 aaPredicted RBP5.28□□□□□ -1.56
SEC22A-201ENST00000309934 C15orf54Q8N8G6 183 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 OR5M8Q8NGP6 311 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 OR5M1Q8NGP8 315 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 SFXN3Q9BWM7 321 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM231Q9H6L2 316 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 FN3KRPQ9HA64 309 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF286AQ9HBT8 521 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 PIGLQ9Y2B2 252 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 URGCP-MRPS24S4R325 110 aa5.28□□□□□ -1.56
SEC22A-201ENST00000309934 KIR2DS1A0A191URI9 304 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 MPTX1A8MV57 137 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 J3QRE1 110 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 SEMA7AO75326 666 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 CA11O75493 328 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 KIR2DS4P43632 304 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 GABRA2P47869 451 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 RAB7AP51149 207 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 KLF3P57682 345 aaPredicted RBP5.27□□□□□ -1.57
SEC22A-201ENST00000309934 RANP62826 216 aaKnown RBP5.27□□□□□ -1.57
SEC22A-201ENST00000309934 KIR2DS1Q14954 304 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 GABRA6Q16445 453 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 C4orf17Q53FE4 359 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 TRAT1Q6PIZ9 186 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 ZDHHC23Q8IYP9 409 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 COMMD1Q8N668 190 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 PRDM14Q9GZV8 571 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 SLC25A32Q9H2D1 315 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 MYOZ1Q9NP98 299 aaPredicted RBP5.27□□□□□ -1.57
SEC22A-201ENST00000309934 GPR84Q9NQS5 396 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 CACNA1HO95180 2353 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 ZFHX3Q15911 3703 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 HTTP42858 3142 aa5.27□□□□□ -1.57
SEC22A-201ENST00000309934 ZIC3O60481 467 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms