RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ANGPTL6Q8NI99 470 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SMIM7Q9BQ49 75 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 VPS25Q9BRG1 176 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 PLSCR3Q9NRY6 295 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 COA4Q9NYJ1 87 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 MPC1Q9Y5U8 109 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 URGCP-MRPS24S4R325 110 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ZNF320A2RRD8 509 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ETHE1O95571 254 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 HIST1H1CP16403 213 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 KIR3DL2P43630 455 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ZFP36L2P47974 494 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 FOXF1Q12946 379 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC25A45Q8N413 288 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 DVL3Q92997 716 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SIRT3Q9NTG7 399 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 IGHV3-64DA0A0J9YX35 117 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 HSBP1O75506 76 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 METAP1P53582 386 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 RNF151Q2KHN1 245 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 CLEC2AQ6UVW9 174 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ZNF793Q6ZN11 406 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 MUC20Q8N307 709 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 K7ESF4 209 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 CD160O95971 181 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 TCRBP04435 133 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC25A5P05141 298 aaKnown RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 IAPPP10997 89 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 GPM6AP51674 278 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC37A1P57057 533 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 LSM11P83369 360 aaKnown RBP eCLIP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 PNLIPRP3Q17RR3 467 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 IQCJQ1A5X6 159 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SPICQ8N5J4 248 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 RNF2Q99496 336 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC45A2Q9UMX9 530 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 FREM1Q5H8C1 2179 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 FAM3AP98173 230 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 ZNF816Q0VGE8 651 aaPredicted RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SPCS2Q15005 226 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC25A35Q3KQZ1 300 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 LCN15Q6UWW0 184 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SIAH3Q8IW03 269 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 PFN4Q8NHR9 129 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 WNT2BQ93097 391 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 TMEM18Q96B42 140 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC17A5Q9NRA2 495 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC7A10Q9NS82 523 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 PSMB2P49721 201 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 RIMKLAQ8IXN7 391 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 OR4C3Q8NH37 302 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 FAM103A1Q9BTL3 118 aaKnown RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 CDCA4Q9BXL8 241 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 MS4A7Q9GZW8 240 aaPredicted RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 ERRFI1Q9UJM3 462 aaPredicted RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 KMT2EQ8IZD2 1858 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 ZAR1LA6NP61 321 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 LIFP15018 202 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 VAMP3Q15836 100 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 C1orf185Q5T7R7 199 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 MRM1Q6IN84 353 aaKnown RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 LYG1Q8N1E2 194 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 RPUSD4Q96CM3 377 aaKnown RBP7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 CSAG2Q9Y5P2 127 aa7.4□□□□□ -1.22
PCDHB1-201ENST00000306549 SPINT1O43278 529 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 GSTZ1O43708 216 aaPredicted RBP7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 IGF2P01344 180 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 NCR3LG1Q68D85 454 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 PBOV1Q9GZY1 135 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 NCKAP5O14513 1909 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 PRF1P14222 555 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 COX7A1P24310 79 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 KIAA0141Q14154 515 aaPredicted RBP7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 CD276Q5ZPR3 534 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC22A18ASQ8N1D0 253 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 TM4SF19Q96DZ7 209 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 MED30Q96HR3 178 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF71Q9NQZ8 489 aaPredicted RBP7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 GDF2Q9UK05 429 aaPredicted RBP7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 KIAA1549LQ6ZVL6 1849 aa7.4□□□□□ -1.23
PCDHB1-201ENST00000306549 UMAD1C9J7I0 102 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CDC14BO60729 498 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CCL4P13236 92 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 NHLH1Q02575 133 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 NHLH2Q02577 135 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 PJVKQ0ZLH3 352 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 HAGHQ16775 308 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CCDC144NLQ6NUI1 221 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 C14orf79Q96F83 325 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CABLES2Q9BTV7 478 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 POMT1Q9Y6A1 747 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 GPR31O00270 319 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CST2P09228 141 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 DAPP51397 102 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 PPP1CBP62140 327 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 LIPNQ5VXI9 398 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 LINC00596Q86U02 117 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 OR51S1Q8NGJ8 323 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 PTPN13Q12923 2485 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms