RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SRSF10O75494 262 aaKnown RBP12.02□□□□□ -0.49
TRIM56-201ENST00000306085 GPX5O75715 221 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 DLK1P80370 383 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 NKAIN4Q8IVV8 208 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 SLCO2B1O94956 709 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 HINT1P49773 126 aaPredicted RBP12.02□□□□□ -0.49
TRIM56-201ENST00000306085 HES3Q5TGS1 186 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 OIT3Q8WWZ8 545 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 AQP10Q96PS8 301 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 SHBQ15464 509 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 HPXP02790 462 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 RTP5Q14D33 572 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 ELFN2Q5R3F8 820 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 GBGT1Q8N5D6 347 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 OR5M9Q8NGP3 310 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 NID2Q14112 1375 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 OR4C45A6NMZ5 311 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 PGA3P0DJD8 388 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 RPS27P42677 84 aaKnown RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 KLF3P57682 345 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 CDC20Q12834 499 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM229BQ8NBD8 167 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 SLCO1C1Q9NYB5 712 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 CDAP32320 146 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 TNXAQ16473 311 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 SLC25A35Q3KQZ1 300 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF441Q8N8Z8 693 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 OR8D4Q8NGM9 314 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 ATOH8Q96SQ7 321 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 S1PR5Q9H228 398 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 UBE2ZQ9H832 354 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 IGKV3D-11A0A0A0MRZ8 115 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 LANCL1O43813 399 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 IGKV3-11P04433 115 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF735P0CB33 412 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 A0A1W2PR80 420 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 B4DEV8 164 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 M0R296 226 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 K7EQS6 105 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 CA6P23280 308 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.492e-9■■■■■ 29.3
TRIM56-201ENST00000306085 OXGR1Q96P68 337 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 ALKBH3Q96Q83 286 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 POMT2Q9UKY4 750 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 VAMP5O95183 116 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 CDX1P47902 265 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 PDCD1Q15116 288 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 ELAVL1Q15717 326 aaKnown RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 HFEQ30201 348 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 DEFB109BQ30KR1 87 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 RPS19BP1Q86WX3 136 aaKnown RBP12.01□□□□□ -0.49
TRIM56-201ENST00000306085 PERPQ96FX8 193 aa12.01□□□□□ -0.49
TRIM56-201ENST00000306085 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 DAOP14920 347 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 PRNTQ86SH4 94 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM183AQ8IXX5 376 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 FPR2P25090 351 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 ACER3Q9NUN7 267 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 MED29Q9NX70 200 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 SIX1Q15475 284 aaPredicted RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM95Q3KNT9 176 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 PRRX2Q99811 253 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 TMED3Q9Y3Q3 217 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 PDE6DO43924 150 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 ANKRD55Q3KP44 614 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 KHDC3LQ587J8 217 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 CLLU1OSQ5K130 101 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 C20orf196Q8IYI0 205 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 IGHV3-43A0A0B4J1X8 118 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 IGHV3-43DP0DP04 118 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 GLDNQ6ZMI3 551 aaPredicted RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 NUFIP2Q7Z417 695 aaKnown RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 SSMEM1Q8WWF3 244 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 MYOZ1Q9NP98 299 aaPredicted RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 HLA-GP17693 338 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 PSG5Q15238 335 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 IGKV3D-15A0A087WSY6 115 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 EIF4E2O60573 245 aaKnown RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 IGKV3-15P01624 115 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 TNFRSF1AP19438 455 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 NPBWR2P48146 333 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 GFRALQ6UXV0 394 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 EDAQ92838 391 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 PRSS50Q9UI38 385 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 FCGR3AP08637 254 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 PTGFRP43088 359 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 CCL17Q92583 94 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 C8orf44Q96CB5 159 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 RASL11BQ9BPW5 248 aa12□□□□□ -0.49
TRIM56-201ENST00000306085 PDCD11Q14690 1871 aaKnown RBP12□□□□□ -0.49
TRIM56-201ENST00000306085 ERVFRD-1P60508 538 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms