RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SLC39A9Q9NUM3 307 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 IGKV1D-43A0A0B4J1Z2 117 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 LOC390937A0A1W2PQ73 354 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 XKRY2A2RUG3 117 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 DHRS7CA6NNS2 312 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 TNFRSF4P43489 277 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 TAS2R60P59551 318 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 CNN3Q15417 329 aaKnown RBP11.46□□□□□ -0.58
TRIM35-201ENST00000305364 SPRED2Q7Z698 418 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 CCDC54Q8NEL0 328 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 KIAA1456Q9P272 454 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 CASP6P55212 293 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 DEFB133Q30KQ1 61 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 RNF144BQ7Z419 303 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 GJC3Q8NFK1 279 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 C14orf144Q96I85 54 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HSD17B6O14756 317 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 FGF8P55075 233 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-201ENST00000305364 PARM1Q6UWI2 310 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 OR11L1Q8NGX0 322 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 M1APQ8TC57 530 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 DYRK2Q92630 601 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 ALKBH4Q9NXW9 302 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 CXCL12P48061 93 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 DYNLT3P51808 116 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 RAB4BP61018 213 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 CST9LP1Q5W188 147 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 WDR5BQ86VZ2 330 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-201ENST00000305364 FLVCR1-AS1Q8TAF5 88 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 PITPNC1Q9UKF7 332 aa11.45□□□□□ -0.58
TRIM35-201ENST00000305364 A0A0A6YYD4 124 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 MMP9P14780 707 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 CTHP32929 405 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 AADACL3Q5VUY0 350 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 NCR3LG1Q68D85 454 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 OR10AD1Q8NGE0 317 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 ST8SIA1Q92185 356 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 MRGPRX1Q96LB2 322 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 SGCZQ96LD1 299 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 PLA2G2FQ9BZM2 168 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 RTN4RQ9BZR6 473 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 EGLN1Q9GZT9 426 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 NKX2-6A6NCS4 301 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 M0R135 149 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 RPL29P47914 159 aaKnown RBP11.44□□□□□ -0.58
TRIM35-201ENST00000305364 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 RAET1LQ5VY80 246 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 C1QL2Q7Z5L3 287 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 ZNF799Q96GE5 643 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 SMDT1Q9H4I9 107 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 KCNS2Q9ULS6 477 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 FRMPD3Q5JV73 1810 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 UNC13CQ8NB66 2214 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 CRYM-AS1A6NIL9 109 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 CD300LBA8K4G0 201 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 IFI6P09912 130 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 COL9A1P20849 921 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 TFF2Q03403 129 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 MYBPHQ13203 477 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 NKAIN1Q4KMZ8 207 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 PLCXD3Q63HM9 321 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 SLC35G3Q8N808 338 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 OR51H1Q8NH63 302 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 ABHD14AQ9BUJ0 271 aa11.44□□□□□ -0.58
TRIM35-201ENST00000305364 ADAM20O43506 726 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 CXCL1P09341 107 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 AADACP22760 399 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 GABRA4P48169 554 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 ERVS71-1P61550 626 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 DLX2Q07687 328 aaPredicted RBP11.43□□□□□ -0.58
TRIM35-201ENST00000305364 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 ALKBH2Q6NS38 261 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 FBXL14Q8N1E6 418 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 ZNF709Q8N972 641 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 IL1F10Q8WWZ1 152 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 MUCL1Q96DR8 90 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
TRIM35-201ENST00000305364 CCL20P78556 96 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
TRIM35-201ENST00000305364 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 PRR18Q8N4B5 295 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 NOXO1Q8NFA2 376 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
TRIM35-201ENST00000305364 RPP25Q9BUL9 199 aaKnown RBP11.43□□□□□ -0.58
TRIM35-201ENST00000305364 ULBP2Q9BZM5 246 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms