RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SLC22A25Q6T423 547 aa13.03□□□□□ -0.32
CCDC116-201ENST00000292779 ARL11Q969Q4 196 aa13.03□□□□□ -0.32
CCDC116-201ENST00000292779 ZC4H2Q9NQZ6 224 aa13.03□□□□□ -0.32
CCDC116-201ENST00000292779 SHANK1Q9Y566 2161 aa13.03□□□□□ -0.32
CCDC116-201ENST00000292779 ZNF816-ZNF321PA0A0X1KG74 233 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 ZNF705EA8MWA4 302 aaPredicted RBP13.02□□□□□ -0.32
CCDC116-201ENST00000292779 ATG12O94817 140 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 FARS2O95363 451 aaKnown RBP13.02□□□□□ -0.32
CCDC116-201ENST00000292779 FXYD4P59646 89 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 SRYQ05066 204 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 MST1LQ2TV78 715 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 SP6Q3SY56 376 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 OR2A2Q6IF42 318 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 DDA1Q9BW61 102 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 IL36GQ9NZH8 169 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 TUBD1Q9UJT1 453 aa13.02□□□□□ -0.32
CCDC116-201ENST00000292779 BOKQ9UMX3 212 aaPredicted RBP13.02□□□□□ -0.32
CCDC116-201ENST00000292779 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.32
CCDC116-201ENST00000292779 XRCC2O43543 280 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 NEURL1O76050 574 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 IFNA21P01568 189 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 ADCYAP1P18509 176 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 CALHM1Q8IU99 346 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 BATF2Q8N1L9 274 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM45BQ96B21 275 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 C1QTNF5Q9BXJ0 243 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 HES7Q9BYE0 225 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 FRYQ5TBA9 3013 aa13.02□□□□□ -0.33
CCDC116-201ENST00000292779 ZNHIT1O43257 154 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 MRPL33O75394 65 aaKnown RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 DEDDO75618 318 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 CELA3AP09093 270 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 RCC1P18754 421 aaPredicted RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 RPL12P30050 165 aaKnown RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 FCGR2CP31995 323 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 ABCA11PQ4W5N1 156 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 OR4A4PQ8NGN8 299 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 TSNAXQ99598 290 aaKnown RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 TAF9BQ9HBM6 251 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 MMP26Q9NRE1 261 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 SLC7A10Q9NS82 523 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 LSM5Q9Y4Y9 91 aaKnown RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 K7EPK0 472 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 GPR31O00270 319 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 TAAR5O14804 337 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 LRP3O75074 770 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 PDCD6O75340 191 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 OR5AC1P0C628 307 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 RBM11P57052 281 aaKnown RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 Q6ZPA2 131 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 OR2M7Q8NG81 312 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 RTN4IP1Q8WWV3 396 aaPredicted RBP13.01□□□□□ -0.33
CCDC116-201ENST00000292779 SPSB4Q96A44 273 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 NAA60Q9H7X0 242 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 KCNIP3Q9Y2W7 256 aa13.01□□□□□ -0.33
CCDC116-201ENST00000292779 SCGB1D2O95969 90 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 NPBWR2P48146 333 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 ARF1P84077 181 aaKnown RBP13□□□□□ -0.33
CCDC116-201ENST00000292779 MALLQ13021 153 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM187Q14656 261 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 SMCO1Q147U7 214 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 PHLDA2Q53GA4 152 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF611Q8N823 705 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 PRDM14Q9GZV8 571 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF703Q9H7S9 590 aaPredicted RBP13□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF286AQ9HBT8 521 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 IGKV3D-15A0A087WSY6 115 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 A0A096LPE4 126 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 A0A1W2PPZ6 126 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 NUDT19A8MXV4 375 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 TOR1AO14656 332 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 CCNOP22674 350 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 LHX2P50458 406 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF169Q14929 603 aaPredicted RBP13□□□□□ -0.33
CCDC116-201ENST00000292779 DAZAP2Q15038 168 aaPredicted RBP13□□□□□ -0.33
CCDC116-201ENST00000292779 GUCA2BQ16661 112 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 ABHD17BQ5VST6 288 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 SLC25A26Q70HW3 274 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 WNT2BQ93097 391 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 TECTBQ96PL2 329 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 PRRX2Q99811 253 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 FAM173AQ9BQD7 235 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 HRH4Q9H3N8 390 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM231Q9H6L2 316 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 PARPBPQ9NWS1 579 aa13□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF629Q9UEG4 869 aaPredicted RBP13□□□□□ -0.33
CCDC116-201ENST00000292779 FTH1P19P0C7X4 201 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 GLI4P10075 376 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 NRN1LQ496H8 165 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 COLCA1Q6ZS62 124 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 PUSL1Q8N0Z8 303 aaKnown RBP12.99□□□□□ -0.33
CCDC116-201ENST00000292779 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 SMIM8Q96KF7 97 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms