RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 C19orf12Q9NSK7 152 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 PAK1IP1Q9NWT1 392 aaPredicted RBP20.69■□□□□ 0.9
PDF-201ENST00000288022 GLS2Q9UI32 602 aa20.69■□□□□ 0.9
PDF-201ENST00000288022 TRIM77I1YAP6 450 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 KDM4BO94953 1096 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 VHLP40337 213 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 BPIFB3P59826 476 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 RPL31P62899 125 aaKnown RBP20.68■□□□□ 0.9
PDF-201ENST00000288022 Q499Y3 187 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 ASPHD2Q6ICH7 369 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 ZNF529Q6P280 563 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 ORAI1Q96D31 301 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 ZNF48Q96MX3 618 aaPredicted RBP20.68■□□□□ 0.9
PDF-201ENST00000288022 CDCA4Q9BXL8 241 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 HMG20AQ9NP66 347 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 GSTK1Q9Y2Q3 226 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 PCDHGB5Q9Y5G0 923 aa20.68■□□□□ 0.9
PDF-201ENST00000288022 IGHV1-69DA0A0B4J2H0 117 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 TRBV5-5A0A0J9YX44 114 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 K7N7A8 449 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 M0R1W7 72 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 IGHV1-69P01742 117 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 ZP1P60852 638 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 SLC35A2P78381 396 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 SPIN3Q5JUX0 258 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 RNLSQ5VYX0 342 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 CRIP3Q6Q6R5 217 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 GDPD3Q7L5L3 318 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 Q8N7P7 452 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 ZSCAN4Q8NAM6 433 aaPredicted RBP20.67■□□□□ 0.9
PDF-201ENST00000288022 OR52N4Q8NGI2 321 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 OR14A2Q96R54 314 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 FAM192AQ9GZU8 254 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 ESM1Q9NQ30 184 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 CKLFQ9UBR5 152 aa20.67■□□□□ 0.9
PDF-201ENST00000288022 A0A1W2PPH5 198 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 GABRR1P24046 479 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 EDDM3BP56851 147 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 RPS11P62280 158 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDF-201ENST00000288022 PRB3Q04118 309 aaPredicted RBP20.66■□□□□ 0.9
PDF-201ENST00000288022 BAMBIQ13145 260 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 DOC2BQ14184 412 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 ZNF146Q15072 292 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 DDI2Q5TDH0 399 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 TNFAIP8L1Q8WVP5 186 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 SNX22Q96L94 193 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 RHOFQ9HBH0 211 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 EXOSC4Q9NPD3 245 aaKnown RBP20.66■□□□□ 0.9
PDF-201ENST00000288022 TMEM138Q9NPI0 162 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 RAB26Q9ULW5 256 aa20.66■□□□□ 0.9
PDF-201ENST00000288022 MDFIC2A0A1B0GVS7 189 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 GABRPO00591 440 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 RGS10O43665 173 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 ZNF737O75373 536 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 BDKRB2P30411 391 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 DLX1P56177 255 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 BDH1Q02338 343 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 MED22Q15528 200 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 DEFB112Q30KQ8 113 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 C1orf122Q6ZSJ8 110 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 OR8H2Q8N162 312 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.65■□□□□ 0.9
PDF-201ENST00000288022 ZDHHC22Q8N966 263 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 OR5D13Q8NGL4 314 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 TBC1D15Q8TC07 691 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 ZFAND2BQ8WV99 257 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 ZDHHC16Q969W1 377 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 DUX5Q96PT3 197 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 OR5M11Q96RB7 305 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 NKX3-1Q99801 234 aaPredicted RBP20.65■□□□□ 0.9
PDF-201ENST00000288022 CCDC90BQ9GZT6 254 aa20.65■□□□□ 0.9
PDF-201ENST00000288022 METTL8Q9H825 291 aaKnown RBP20.65■□□□□ 0.9
PDF-201ENST00000288022 A0A1W2PPK0 400 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 TMEM82A0PJX8 343 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 SIRPB1O00241 398 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 SH2D1BO14796 132 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 SCN1BQ07699 218 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 EDDM3AQ14507 147 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 SPHARQ15513 63 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 TUSC1Q2TAM9 212 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 TMEM200BQ69YZ2 307 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 SPATA3Q8NHX4 192 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 CHST6Q9GZX3 395 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 DUSP21Q9H596 190 aa20.64■□□□□ 0.89
PDF-201ENST00000288022 SEBOXQ9HB31 216 aaPredicted RBP20.64■□□□□ 0.89
PDF-201ENST00000288022 DNAJC9-AS1A6NH13 148 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 ALDOBP05062 364 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 CD1AP06126 327 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 CRHBPP24387 322 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 ZNF93P35789 620 aaPredicted RBP20.63■□□□□ 0.89
PDF-201ENST00000288022 UBA52P62987 128 aaKnown RBP20.63■□□□□ 0.89
PDF-201ENST00000288022 GUCA2AQ02747 115 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 ACSM1Q08AH1 577 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 KLRD1Q13241 179 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 RSU1Q15404 277 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 GRK1Q15835 563 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 C17orf107Q6ZR85 190 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 PXT1Q8NFP0 134 aa20.63■□□□□ 0.89
PDF-201ENST00000288022 A0A1W2PRD5 423 aa20.62■□□□□ 0.89
PDF-201ENST00000288022 A0A1W2PRF3 423 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms