RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 RIBC2Q9H4K1 309 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 SERTAD4Q9NUC0 356 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 RBFOX1Q9NWB1 397 aaKnown RBP10.29□□□□□ -0.76
CD44-203ENST00000278386 IL36RNQ9UBH0 155 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 GNG8Q9UK08 70 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 LINC00312Q9Y6C7 94 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 SESN1Q9Y6P5 492 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 IGHV2-26A0A0B4J1V2 119 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 TMEM82A0PJX8 343 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 ALDOBP05062 364 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 OCM2P0CE71 109 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 OCMP0CE72 109 aaPredicted RBP10.28□□□□□ -0.76
CD44-203ENST00000278386 ZNF20P17024 532 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 JUNBP17275 347 aaPredicted RBP10.28□□□□□ -0.76
CD44-203ENST00000278386 BCL3P20749 454 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 FASP25445 335 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 DUSP1P28562 367 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 ATP1B3P54709 279 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 ZNF91Q05481 1191 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 LDLRAD2Q5SZI1 272 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 KPRPQ5T749 579 aaPredicted RBP10.28□□□□□ -0.76
CD44-203ENST00000278386 MINOS1Q5TGZ0 78 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 REC114Q7Z4M0 266 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 AMIGO2Q86SJ2 522 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 ENTHD1Q8IYW4 607 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 Q8N2B8 174 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 PRSS35Q8N3Z0 413 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 CCDC54Q8NEL0 328 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 MRAPQ8TCY5 172 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 PP6455Q8WZ26 134 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 CIB1Q99828 191 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 CITED2Q99967 270 aaPredicted RBP10.28□□□□□ -0.76
CD44-203ENST00000278386 CLEC7AQ9BXN2 247 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 MINOS1-NBL1R4GNA1 71 aa10.28□□□□□ -0.76
CD44-203ENST00000278386 A0A1W2PRX2 142 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 H3BUI4 141 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 SIRPB1O00241 398 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 SULT1C4O75897 302 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 CALCBP10092 127 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 FCGR1AP12314 374 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 RBP2P50120 134 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 EFNB1P98172 346 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 EMX1Q04741 257 aaPredicted RBP10.27□□□□□ -0.77
CD44-203ENST00000278386 TP53I3Q53FA7 332 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 OXLD1Q5BKU9 147 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 ZBTB49Q6ZSB9 765 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 FAM58AQ8N1B3 248 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 CAPSLQ8WWF8 208 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 SGCDQ92629 289 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 C10orf35Q96D05 121 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 TMEM133Q9H2Q1 129 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 GLS2Q9UI32 602 aa10.27□□□□□ -0.77
CD44-203ENST00000278386 TRBV2A0A0J9YWF9 115 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 MGST3O14880 152 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 PF4V1P10720 104 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 AZGP1P25311 298 aaKnown RBP10.26□□□□□ -0.77
CD44-203ENST00000278386 HTR1DP28221 377 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 KIR3DL2P43630 455 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 NPBWR2P48146 333 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 DYNLT3P51808 116 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 IL18R1Q13478 541 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 FBLN7Q53RD9 439 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 C1orf146Q5VVC0 180 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 Q6ZPA2 131 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 LHFPL2Q6ZUX7 228 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 RDH10Q8IZV5 341 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 OR52N4Q8NGI2 321 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 RFKQ969G6 155 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 RFT1Q96AA3 541 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 ADAT3Q96EY9 351 aaPredicted RBP10.26□□□□□ -0.77
CD44-203ENST00000278386 EXOSC4Q9NPD3 245 aaKnown RBP10.26□□□□□ -0.77
CD44-203ENST00000278386 AP4S1Q9Y587 144 aa10.26□□□□□ -0.77
CD44-203ENST00000278386 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 TRGV10A0A0A0MS01 117 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 FAM172BPA6NC97 362 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 SAC3D1A6NKF1 404 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 PSPNO60542 156 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 ENTPD6O75354 484 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 ATF1P18846 271 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 CD33P20138 364 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 PRKACBP22694 351 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 POLR2IP36954 125 aaKnown RBP10.25□□□□□ -0.77
CD44-203ENST00000278386 OR3A1P47881 315 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 ARHGDIBP52566 201 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 MTCP1P56278 107 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 P2RX3P56373 397 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 CDC42P60953 191 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 BLCAPP62952 87 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 ZNF85Q03923 595 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 SPIN3Q5JUX0 258 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 TMEM244Q5VVB8 128 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 Q6ZS46 218 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 DNAAF1Q8NEP3 725 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 OR4P4Q8NGL7 312 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 OR8J1Q8NGP2 316 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 EME1Q96AY2 570 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 PHF21AQ96BD5 680 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 AKR1E2Q96JD6 320 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 OPALINQ96PE5 141 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms