RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ZNF705GA8MUZ8 300 aaPredicted RBP9.93□□□□□ -0.82
USP6NL-201ENST00000277575 RFPL4AL1F8VTS6 287 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 PGA3P0DJD8 388 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 ST3GAL2Q16842 350 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 RPUSD3Q6P087 351 aaKnown RBP9.93□□□□□ -0.82
USP6NL-201ENST00000277575 FAM122CQ6P4D5 195 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 NHLRC1Q6VVB1 395 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 TMEM251Q8N6I4 163 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 ZNF485Q8NCK3 441 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 OR5D13Q8NGL4 314 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 PATZ1Q9HBE1 687 aaKnown RBP9.93□□□□□ -0.82
USP6NL-201ENST00000277575 PLSCR3Q9NRY6 295 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 KIF13BQ9NQT8 1826 aa9.93□□□□□ -0.82
USP6NL-201ENST00000277575 TTC28Q96AY4 2481 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 RAB19A4D1S5 217 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 H7BYZ3 331 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 SOCS1O15524 211 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 CSN1S1P47710 185 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ARL16Q0P5N6 197 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ESPL1Q14674 2120 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 Q3ZCU0 254 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ADAM5Q6NVV9 412 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 RPEQ96AT9 228 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 VWCEQ96DN2 955 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
USP6NL-201ENST00000277575 DDA1Q9BW61 102 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 TGIF2Q9GZN2 237 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 MRPS18AQ9NVS2 196 aaKnown RBP9.92□□□□□ -0.82
USP6NL-201ENST00000277575 IGHV1-45A0A0A0MS14 117 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ZNF727A8MUV8 499 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 NUDT19A8MXV4 375 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 UPK3AO75631 287 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 COL19A1Q14993 1142 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 TRAT1Q6PIZ9 186 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 TMEM230Q96A57 120 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 MARVELD1Q9BSK0 173 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ANGPTL4Q9BY76 406 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 NMES1Q9C002 83 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 RASL12Q9NYN1 266 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ONECUT1Q9UBC0 465 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 IGHV3-43A0A0B4J1X8 118 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ANKRD20A5PA0PJZ0 165 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ALX3O95076 343 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 SFT2D2O95562 160 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 PNPP00491 289 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 IGHV3-43DP0DP04 118 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 RAB1CQ92928 201 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 GMPPAQ96IJ6 420 aaPredicted RBP9.92□□□□□ -0.82
USP6NL-201ENST00000277575 NEURL2Q9BR09 285 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 TMEM231Q9H6L2 316 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 OR6C3Q9NZP0 311 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 SNRNP200O75643 2136 aaKnown RBP9.92□□□□□ -0.82
USP6NL-201ENST00000277575 BCL2L11O43521 198 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 AGFG2O95081 481 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 CT45A10P0DMU9 189 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 CACNA1DQ01668 2161 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 IGFBP7Q16270 282 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 SZT2Q5T011 3432 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ZNF787Q6DD87 383 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 TMEM91Q6ZNR0 172 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 OR4F5Q8NH21 305 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 OR4F4Q96R69 305 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 PECRQ9BY49 303 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 GAL3ST2Q9H3Q3 398 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 RAB18Q9NP72 206 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 MTCH1Q9NZJ7 389 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 ANXA10Q9UJ72 324 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 OSGIN2Q9Y236 505 aa9.92□□□□□ -0.82
USP6NL-201ENST00000277575 MRPS18BQ9Y676 258 aaKnown RBP9.92□□□□□ -0.82
USP6NL-201ENST00000277575 VCANP13611 3396 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 LPAR6P43657 344 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 SSTP61278 116 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 ZP4Q12836 540 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 TIGITQ495A1 244 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 INO80CQ6PI98 192 aaPredicted RBP9.91□□□□□ -0.82
USP6NL-201ENST00000277575 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 ACY3Q96HD9 319 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 TCEAL7Q9BRU2 100 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 SOX7Q9BT81 388 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 RAB1BQ9H0U4 201 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.91□□□□□ -0.82
USP6NL-201ENST00000277575 COL6A6A6NMZ7 2263 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 UMAD1C9J7I0 102 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 IGHV3-13P01766 116 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 IGHV3-7P01780 117 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 RAB5CP51148 216 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 UCNP55089 124 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 FOXO1Q12778 655 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 PXDC1Q5TGL8 231 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 FAM27BQ5VT28 67 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 PRR7Q8TB68 274 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 CTHRC1Q96CG8 243 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 RPUSD4Q96CM3 377 aaKnown RBP9.91□□□□□ -0.82
USP6NL-201ENST00000277575 MAP6Q96JE9 813 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 WFDC6Q9BQY6 131 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 BRCA1P38398 1863 aaKnown RBP9.91□□□□□ -0.82
USP6NL-201ENST00000277575 C9orf170A2RU37 121 aa9.91□□□□□ -0.82
USP6NL-201ENST00000277575 NCBP2LA6PVI3 153 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms