RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MSRB2Q9Y3D2 182 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 CTDSPLO15194 276 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 SYNGR3O43761 229 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 RFPL4BQ6ZWI9 263 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 ADAMTS17Q8TE56 1095 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 NARFLQ9H6Q4 476 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 SPTBN1Q01082 2364 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 B3GALT5-AS1P59052 145 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 NLRC3Q7RTR2 1065 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 OR8U1Q8NH10 309 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 DDOQ99489 341 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A1W2PPH5 198 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 NXPH3O95157 252 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 IGHV1-2P23083 117 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 RPL23AP62750 156 aaKnown RBP12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 TLE1Q04724 770 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 SNTB1Q13884 538 aaKnown RBP12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 PURGQ9UJV8 347 aaKnown RBP12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 PLA2G10O15496 165 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 RPS11P62280 158 aaKnown RBP eCLIP12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 STX12Q86Y82 276 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 SAP30LQ9HAJ7 183 aa12.52□□□□□ -0.4
PDLIM2-201ENST00000265810 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 C1orf100Q5SVJ3 147 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 CDH26Q8IXH8 852 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 OR5AP2Q8NGF4 316 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 PROK2Q9HC23 129 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 TRGV10A0A0A0MS01 117 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 MPPED1O15442 326 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 NDUFB3O43676 98 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 GPR12P47775 334 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 CCL8P80075 99 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 FHL1Q13642 323 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 BCL2L2Q92843 193 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 PIK3IP1Q96FE7 263 aa12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-201ENST00000265810 HLA-DQB1P01920 261 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 OMGP23515 440 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 AK3Q9UIJ7 227 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 DYRK2Q92630 601 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 UPRTQ96BW1 309 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 SLC25A38Q96DW6 304 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 SERPINF1P36955 418 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 LGALS4P56470 323 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 LY6DQ14210 128 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 OR10V1Q8NGI7 309 aa12.51□□□□□ -0.41
PDLIM2-201ENST00000265810 K7EPK0 472 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 SLC6A1P30531 599 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 MOGAT2Q3SYC2 334 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 LRRC10Q5BKY1 277 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 FAM71E2Q8N5Q1 922 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 MS4A5Q9H3V2 200 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 TREM1Q9NP99 234 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 LRP5LA4QPB2 252 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 SNRPGP15A8MWD9 76 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 TMEM128Q5BJH2 165 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 LYG2Q86SG7 212 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 MRGPRDQ8TDS7 321 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 GPX8Q8TED1 209 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 PTX4Q96A99 478 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 LPAR5Q9H1C0 372 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 FOXD3Q9UJU5 478 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 TRIM64BA6NI03 449 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 I3L521 148 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 GPR137BO60478 399 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 INHBBP09529 407 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 PRF1P14222 555 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 SP6Q3SY56 376 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 TMEM268Q5VZI3 342 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 ATPIF1Q9UII2 106 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 TRAV39A0A0B4J263 110 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 DEFB108AA8MXU0 73 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 RAB27BO00194 218 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 HAND1O96004 215 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 ZNF826PQ6ZT77 177 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 HDHD3Q9BSH5 251 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 RNF122Q9H9V4 155 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 ANXA10Q9UJ72 324 aa12.5□□□□□ -0.41
PDLIM2-201ENST00000265810 IGKV3D-15A0A087WSY6 115 aa12.49□□□□□ -0.41
PDLIM2-201ENST00000265810 A0A1B0GV50 99 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms