RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 POU2F2P09086 479 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 IGFBP3P17936 291 aaPredicted RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 MDKP21741 143 aaPredicted RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 CXCL12P48061 93 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 RAB1AP62820 205 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 APCDD1LQ8NCL9 501 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 EXTL1Q92935 676 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 LRRK1Q38SD2 2015 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF587BE7ETH6 402 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF708P17019 499 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 GALNSP34059 522 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 PPP1CCP36873 323 aaKnown RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 FGF8P55075 233 aaPredicted RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 RUNX1Q01196 453 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 TMEM267Q0VDI3 215 aaPredicted RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 SMAD4Q13485 552 aaKnown RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 BATFQ16520 125 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 CST9LP1Q5W188 147 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 DHRS7BQ6IAN0 325 aaPredicted RBP15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 AQP10Q96PS8 301 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 SSX3Q99909 188 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 KIAA1671Q9BY89 1806 aa15.39■□□□□ 0.05
NDFIP1-201ENST00000253814 GUSBP11Q6P575 273 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 RASL10BQ96S79 203 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 LHX6Q9UPM6 363 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 IL2RAP01589 272 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 NAT2P11245 290 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 HOXC12P31275 282 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 C1orf87Q8N0U7 546 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 MCTS1Q9ULC4 181 aaKnown RBP15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 C5orf49A4QMS7 147 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 NKX2-6A6NCS4 301 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 MBPP02686 304 aaPredicted RBP15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 RABEPKQ7Z6M1 372 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 HIST1H2BAQ96A08 127 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 TMPRSS5Q9H3S3 457 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 FSCN3Q9NQT6 498 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 ABI3Q9P2A4 366 aa15.38■□□□□ 0.05
NDFIP1-201ENST00000253814 SMIM6P0DI80 62 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 FUT3P21217 361 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 MLF1P58340 268 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF787Q6DD87 383 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 LHFPL2Q6ZUX7 228 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF610Q8N9Z0 462 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 OR1F12Q8NHA8 337 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 GNPNAT1Q96EK6 184 aaPredicted RBP15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 C3orf85A0A1B0GTC6 90 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 RBFOX3A6NFN3 312 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 FOSL2P15408 326 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 KLK2P20151 261 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 GPM6AP51674 278 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF528Q3MIS6 628 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 LIAT1Q6ZQX7 453 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 MTCH2Q9Y6C9 303 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 SHANK1Q9Y566 2161 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 CCDC187A0A096LP49 1063 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 UBE2V2Q15819 145 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 SYT13Q7L8C5 426 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 SLC35G3Q8N808 338 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 UBAC2Q8NBM4 344 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 OR10J5Q8NHC4 309 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 INTS12Q96CB8 462 aaKnown RBP15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 TVP23CQ96ET8 276 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 FAM117AQ9C073 453 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 PLEKHF2Q9H8W4 249 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 MYOZ1Q9NP98 299 aaPredicted RBP15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 TIMM10BQ9Y5J6 103 aa15.37■□□□□ 0.05
NDFIP1-201ENST00000253814 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 LHX4Q969G2 390 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 SPSB1Q96BD6 273 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 KCNIP1Q9NZI2 227 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 ZMAT5Q9UDW3 170 aaKnown RBP15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 LINC00587B1AMM8 73 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 RAC2P15153 192 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 FNDC7Q5VTL7 733 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 RARRES2Q99969 163 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 TMED3Q9Y3Q3 217 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 A0A1B0GTQ1 180 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 CELA2AP08217 269 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 ATP6V0CP27449 155 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 CCL7P80098 99 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 CDCP2Q5VXM1 449 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 COMMD1Q8N668 190 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 EDEM2Q9BV94 578 aa15.36■□□□□ 0.05
NDFIP1-201ENST00000253814 DEDDO75618 318 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 DFFBO76075 338 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 IFI6P09912 130 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 APLNRP35414 380 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 DYNLT3P51808 116 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 HBG1P69891 147 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 HBG2P69892 147 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 PMP22Q01453 160 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 EWSR1Q01844 656 aaKnown RBP eCLIP15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF154Q13106 437 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 SURF2Q15527 256 aaPredicted RBP15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 POC1AQ8NBT0 407 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 OR52M1Q8NGK5 317 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF576Q9H609 170 aa15.35■□□□□ 0.05
NDFIP1-201ENST00000253814 ZNF319Q9P2F9 582 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms