RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 HMGB3O15347 200 aaKnown RBP13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 MMP7P09237 267 aaPredicted RBP13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 HOXA5P20719 270 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 FGF7P21781 194 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 FZD2Q14332 565 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 ZNF66Q6ZN08 573 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 OR52M1Q8NGK5 317 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 SLC2A9Q9NRM0 540 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 COL4A3Q01955 1670 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 LTBRP36941 435 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 CAPZBP47756 277 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 PKIAP61925 76 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 CNN3Q15417 329 aaKnown RBP13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 GFI1BQ5VTD9 330 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 ZNF385CQ66K41 422 aaPredicted RBP13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 ZNF787Q6DD87 383 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 TMEM156Q8N614 296 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 IL22RA1Q8N6P7 574 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 SLC25A43Q8WUT9 341 aaPredicted RBP13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 GPHA2Q96T91 129 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 SLC39A9Q9NUM3 307 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 ZDHHC8Q9ULC8 765 aa13.95□□□□□ -0.18
SLC6A8-201ENST00000253122 SHANK1Q9Y566 2161 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 FANCMQ8IYD8 2048 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 H7BYZ3 331 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 LDLRAD4O15165 306 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 RND3P61587 244 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 H3F3AP84243 136 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 PLEKHF2Q9H8W4 249 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 ST3GAL6Q9Y274 331 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 ATXN7O15265 892 aaPredicted RBP13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 MMP9P14780 707 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 IL13RA2Q14627 380 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 CDCP2Q5VXM1 449 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 CST9LP1Q5W188 147 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 SPNS3Q6ZMD2 512 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 C9orf40Q8IXQ3 194 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 ST8SIA1Q92185 356 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 SMIM7Q9BQ49 75 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 NKX2-6A6NCS4 301 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 CD300LBA8K4G0 201 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 DFFBO76075 338 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 NOVA1P51513 510 aaKnown RBP13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 LIAT1Q6ZQX7 453 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 TSTD1Q8NFU3 115 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 MRGPRFQ96AM1 343 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 MALSU1Q96EH3 234 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 ABHD14AQ9BUJ0 271 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 BCO1Q9HAY6 547 aa13.94□□□□□ -0.18
SLC6A8-201ENST00000253122 A0A0A6YYD4 124 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 MS4A18H0YCH9 400 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 ADAM20O43506 726 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 PGA4P0DJD7 388 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 PGA5P0DJD9 388 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 MS4A18Q3C1V0 323 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 OR5L2Q8NGL0 311 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 GPBAR1Q8TDU6 330 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 ZNF524Q96C55 264 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 FGF21Q9NSA1 209 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 PTBP3O95758 552 aaKnown RBP13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 MSR1P21757 451 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 DYNLT3P51808 116 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 OR1D5P58170 312 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 WDR5BQ86VZ2 330 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 ZNF709Q8N972 641 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 NOXO1Q8NFA2 376 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 OR1N1Q8NGS0 311 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 LMAN1LQ9HAT1 526 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 DKKL1Q9UK85 242 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 RFNGQ9Y644 331 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 MYO7BQ6PIF6 2116 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 DENND4AQ7Z401 1863 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 DBX1A6NMT0 343 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 TRGC1P0CF51 173 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 IAPPP10997 89 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 HTR5AP47898 357 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 RNF4P78317 190 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 NKAIN1Q4KMZ8 207 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 C10orf91Q5T1B1 145 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 GABRG3Q99928 467 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 OSGIN2Q9Y236 505 aa13.93□□□□□ -0.18
SLC6A8-201ENST00000253122 KHDC3LQ587J8 217 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 PLXDC1Q8IUK5 500 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 FAM185AQ8N0U4 392 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 TRAPPC6AO75865 159 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 IGHV2-70P01814 119 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 SRPXP78539 464 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 OR8G2PQ6IF36 304 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 SLC35G3Q8N808 338 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 RNF122Q9H9V4 155 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 DOCK7Q96N67 2140 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 MYF5P13349 255 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 ZNF154Q13106 437 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 AADACL3Q5VUY0 350 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 OR5AS1Q8N127 324 aa13.92□□□□□ -0.18
SLC6A8-201ENST00000253122 HS3ST3A1Q9Y663 406 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms