RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PIPP12273 146 aaPredicted RBP18.77■□□□□ 0.6
LSM4-201ENST00000252816 CCL3L1P16619 93 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 EEF1B2P24534 225 aaKnown RBP18.77■□□□□ 0.6
LSM4-201ENST00000252816 SOX2P48431 317 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 ST3GAL4Q11206 333 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 NCR3LG1Q68D85 454 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 ASPHD2Q6ICH7 369 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 C17orf107Q6ZR85 190 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 TFAP2CQ92754 450 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 CHIAQ9BZP6 476 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 SEBOXQ9HB31 216 aaPredicted RBP18.77■□□□□ 0.6
LSM4-201ENST00000252816 BABAM2Q9NXR7 383 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 HAX1O00165 279 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 OGG1O15527 345 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 SULT1B1O43704 296 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 PRKACAP17612 351 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 UBE2E1P51965 193 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 SNU13P55769 128 aaKnown RBP18.76■□□□□ 0.59
LSM4-201ENST00000252816 ERVFRD-1P60508 538 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 SLC34A1Q06495 639 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 ZNF146Q15072 292 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 ZNF529Q6P280 563 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 LDLRAD3Q86YD5 345 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 TMEM86BQ8N661 226 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 ZNF485Q8NCK3 441 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 OR5D13Q8NGL4 314 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 OR52N1Q8NH53 320 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 SSMEM1Q8WWF3 244 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 NRG4Q8WWG1 115 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 HMG20AQ9NP66 347 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 PSORS1C1Q9UIG5 152 aa18.76■□□□□ 0.59
LSM4-201ENST00000252816 KDM4BO94953 1096 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 IGHV4-59P01825 116 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 HCKP08631 526 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 SAA4P35542 130 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 ZP1P60852 638 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 KISS1Q15726 138 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 FIP1L1Q6UN15 594 aaKnown RBP18.75■□□□□ 0.59
LSM4-201ENST00000252816 OR8H2Q8N162 312 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 C3orf56Q8N813 242 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 OR52N4Q8NGI2 321 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 OR51A2Q8NGJ7 313 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 TBC1D15Q8TC07 691 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 GPR148Q8TDV2 347 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 SNX22Q96L94 193 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 VCXQ9H320 206 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 NEK6Q9HC98 313 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 CNOT2Q9NZN8 540 aaKnown RBP18.75■□□□□ 0.59
LSM4-201ENST00000252816 FAM96BQ9Y3D0 163 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 POMT1Q9Y6A1 747 aa18.75■□□□□ 0.59
LSM4-201ENST00000252816 MEX3AA1L020 520 aaKnown RBP18.74■□□□□ 0.59
LSM4-201ENST00000252816 MEIOCA2RUB1 952 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 FAM181BA6NEQ2 426 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 EFCAB10A6NFE3 127 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 PSPNO60542 156 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 IER3P46695 156 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 DLX6P56179 175 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 EDDM3BP56851 147 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 FOXL1Q12952 345 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 TCF23Q7RTU1 214 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 SAXO1Q8IYX7 474 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 ZFP41Q8N8Y5 198 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 SMIM19Q96E16 107 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 CHST6Q9GZX3 395 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 PLCXD1Q9NUJ7 323 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 CHCHD3Q9NX63 227 aaKnown RBP18.74■□□□□ 0.59
LSM4-201ENST00000252816 TAS2R4Q9NYW5 299 aa18.74■□□□□ 0.59
LSM4-201ENST00000252816 A0A1W2PPH5 198 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 ERICH4A6NGS2 130 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 GABRR1P24046 479 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 C21orf33P30042 268 aaPredicted RBP18.73■□□□□ 0.59
LSM4-201ENST00000252816 ACSM1Q08AH1 577 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 DOC2BQ14184 412 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 EDDM3AQ14507 147 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 SPIN3Q5JUX0 258 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 DMKNQ6E0U4 476 aaPredicted RBP18.73■□□□□ 0.59
LSM4-201ENST00000252816 AHSA2Q719I0 299 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 GDPD3Q7L5L3 318 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 ZSCAN4Q8NAM6 433 aaPredicted RBP18.73■□□□□ 0.59
LSM4-201ENST00000252816 BPIFB6Q8NFQ5 453 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 OR13C5Q8NGS8 318 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 C17orf50Q8WW18 174 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 GSTK1Q9Y2Q3 226 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 ZNF281Q9Y2X9 895 aa18.73■□□□□ 0.59
LSM4-201ENST00000252816 SF3B6Q9Y3B4 125 aaKnown RBP18.73■□□□□ 0.59
LSM4-201ENST00000252816 FBP1P09467 338 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 TMEM225BP0DP42 221 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 RAB3AP20336 220 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 AQP4P55087 323 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 MED21Q13503 144 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 GRK1Q15835 563 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 OR4S1Q8NGB4 309 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 GHSRQ92847 366 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 TMEM106AQ96A25 262 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 AJUBAQ96IF1 538 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 FKBP14Q9NWM8 211 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 ZNRD1Q9P1U0 126 aa18.72■□□□□ 0.59
LSM4-201ENST00000252816 C17orf98A8MV24 154 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 SIRPB1O00241 398 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 CD2P06729 351 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms