RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PARP11Q9NR21 331 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 DNAJB11Q9UBS4 358 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF107Q9UII5 783 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 CCDC187A0A096LP49 1063 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 A0A1W2PQD3 144 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 SNCAP37840 140 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 EIF2S3P41091 472 aaKnown RBP10.44□□□□□ -0.74
USHBP1-201ENST00000252597 TSC22D1Q15714 1073 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 LPAL2Q16609 132 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 AKR1C8PQ5T2L2 129 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 SLC25A26Q70HW3 274 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 LRP11Q86VZ4 500 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF845Q96IR2 970 aaPredicted RBP10.44□□□□□ -0.74
USHBP1-201ENST00000252597 SHDQ96IW2 340 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 SLC35B3Q9H1N7 401 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 NECAP2Q9NVZ3 263 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 PI4KAP42356 2102 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 A0A096LPE4 126 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 A0A1W2PPZ6 126 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 PQLC2LA1A4F0 135 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 ZFAND5O76080 213 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 S100A8P05109 93 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 BMP5P22003 454 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 NKX2-1P43699 371 aaPredicted RBP10.44□□□□□ -0.74
USHBP1-201ENST00000252597 RPL23AP62750 156 aaKnown RBP10.44□□□□□ -0.74
USHBP1-201ENST00000252597 DEFA6Q01524 100 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 RHEBQ15382 184 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 C5orf46Q6UWT4 87 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 ANKRD37Q7Z713 158 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 SPTA1P02549 2419 aa10.44□□□□□ -0.74
USHBP1-201ENST00000252597 IGHV1OR15-9A0A0B4J2B8 117 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 LMO7DNF2Z398 122 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 AP4M1O00189 453 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 MMP9P14780 707 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 FABP4P15090 132 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 AADACP22760 399 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 PNLIPRP3Q17RR3 467 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 DEFB123Q8N688 67 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF383Q8NA42 475 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 MR1Q95460 341 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 SPTSSAQ969W0 71 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 OCSTAMPQ9BR26 566 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 GPR61Q9BZJ8 451 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 CRLF2Q9HC73 371 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 MYOTQ9UBF9 498 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 TGIF2-C20orf24A0A0A6YYL0 155 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 DHRS3O75911 302 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 CD5P06127 495 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 OR8U8P0C7N1 319 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 ELLP55199 621 aaPredicted RBP10.43□□□□□ -0.74
USHBP1-201ENST00000252597 CTAG1AP78358 180 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 NKX6-1P78426 367 aaPredicted RBP10.43□□□□□ -0.74
USHBP1-201ENST00000252597 DCDP81605 110 aaKnown RBP10.43□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF154Q13106 437 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 IGFBP7Q16270 282 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 PLPPR5Q32ZL2 321 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 LGI3Q8N145 548 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 CYB561D1Q8N8Q1 229 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 UBAC2Q8NBM4 344 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 DOCK10Q96BY6 2186 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 SYT3Q9BQG1 590 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 NAA60Q9H7X0 242 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 HSF4Q9ULV5 492 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 TRBV6-7A0A0A0MS04 114 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 C5orf52A6NGY3 159 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 SERPINE3A8MV23 424 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 TERTO14746 1132 aaKnown RBP10.43□□□□□ -0.74
USHBP1-201ENST00000252597 ADAM20O43506 726 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 IAPPP10997 89 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 PLA2G5P39877 138 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 SRSF4Q08170 494 aaKnown RBP10.43□□□□□ -0.74
USHBP1-201ENST00000252597 TMEM267Q0VDI3 215 aaPredicted RBP10.43□□□□□ -0.74
USHBP1-201ENST00000252597 FAM189A2Q15884 450 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 THNSL2Q86YJ6 484 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 OR5L2Q8NGL0 311 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 POC1BQ8TC44 478 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 OXGR1Q96P68 337 aa10.43□□□□□ -0.74
USHBP1-201ENST00000252597 BDP1A6H8Y1 2624 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 CXorf65A6NEN9 183 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 LILRA5A6NI73 299 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF705GA8MUZ8 300 aaPredicted RBP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 NUDT19A8MXV4 375 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 H3BQ15 152 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 HS3ST1O14792 307 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 SCAF4O95104 1147 aaKnown RBP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 SMIM6P0DI80 62 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 RPS2P15880 293 aaKnown RBP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 CD27P26842 260 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 MALLQ13021 153 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 TESK1Q15569 626 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 MPV17LQ2QL34 196 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 OR2B11Q5JQS5 317 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 NSUN5P2Q63ZY6 315 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 ALKBH2Q6NS38 261 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 LINC00469Q8N7U9 141 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 CPNE4Q96A23 557 aaPredicted RBP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 TP53RKQ96S44 253 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 DOCK11Q5JSL3 2073 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms