RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CRHBPP24387 322 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 SRP14P37108 136 aaKnown RBP11.29□□□□□ -0.6
VEGFA-201ENST00000230480 RBP2P50120 134 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 CAV3P56539 151 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ASCL4Q6XD76 172 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 TMPRSS11AQ6ZMR5 421 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 TCF23Q7RTU1 214 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ZDHHC22Q8N966 263 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ST8SIA4Q92187 359 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 BORCS8Q96FH0 119 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 CYYR1Q96J86 154 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 SLC6A7Q99884 636 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 PPIL3Q9H2H8 161 aaKnown RBP11.29□□□□□ -0.6
VEGFA-201ENST00000230480 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 C19orf12Q9NSK7 152 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF581Q9P0T4 197 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 DNAJB11Q9UBS4 358 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 SLC7A11Q9UPY5 501 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF281Q9Y2X9 895 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 CENPVL3A0A0U1RRI6 287 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
VEGFA-201ENST00000230480 GPX5O75715 221 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 RGS9O75916 674 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-201ENST00000230480 KDM4BO94953 1096 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 CD1AP06126 327 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 PRKACBP22694 351 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 GABRA2P47869 451 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 ATP1B3P54709 279 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 DLX6P56179 175 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 MTCP1P56278 107 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 WNT4P56705 351 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 ARF6P62330 175 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 IL13RA1P78552 427 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 OXA1LQ15070 435 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 C17orf107Q6ZR85 190 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 SLC36A1Q7Z2H8 476 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 PHC2Q8IXK0 858 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 Q8NFD4 153 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 OR5D18Q8NGL1 313 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 SPSB1Q96BD6 273 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 MRPL48Q96GC5 212 aaKnown RBP11.28□□□□□ -0.6
VEGFA-201ENST00000230480 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 CEP19Q96LK0 163 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 SEBOXQ9HB31 216 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-201ENST00000230480 SLC25A10Q9UBX3 287 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-201ENST00000230480 NUP50Q9UKX7 468 aa11.28□□□□□ -0.6
VEGFA-201ENST00000230480 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 K7N7A8 449 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 NDUFB3O43676 98 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 SULT1B1O43704 296 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 PSPNO60542 156 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 ECDO95905 644 aaPredicted RBP11.27□□□□□ -0.61
VEGFA-201ENST00000230480 SERPINA3P01011 423 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 KNG1P01042 644 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 ZNF20P17024 532 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 MYL12AP19105 171 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 DUSP1P28562 367 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
VEGFA-201ENST00000230480 BMXP51813 675 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 COL10A1Q03692 680 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 CNN3Q15417 329 aaKnown RBP11.27□□□□□ -0.61
VEGFA-201ENST00000230480 KISS1Q15726 138 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 RBM48Q5RL73 367 aaKnown RBP11.27□□□□□ -0.61
VEGFA-201ENST00000230480 GPR107Q5VW38 600 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 CD276Q5ZPR3 534 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 RUSC1-AS1Q66K80 236 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 Q6P435 159 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 SERPINA12Q8IW75 414 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 STX19Q8N4C7 294 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 HAVCR2Q8TDQ0 301 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 GPR148Q8TDV2 347 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM158Q8WZ71 300 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 MED30Q96HR3 178 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 HMG20AQ9NP66 347 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 DHDHQ9UQ10 334 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.61
VEGFA-201ENST00000230480 PNMA8CA0A1B0GUJ8 204 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 A0A1W2PPK0 400 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 RNF212BA8MTL3 300 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 GABRPO00591 440 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 SC5DO75845 299 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 NXPH2O95156 264 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 LIPFP07098 398 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 MAP2K4P45985 399 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 POU3F4P49335 361 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 HILS1P60008 231 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms