RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 GJC3Q8NFK1 279 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 TMEM171Q8WVE6 324 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 NTNG2Q96CW9 530 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 MALSU1Q96EH3 234 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 TGIF2Q9GZN2 237 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 NELFAQ9H3P2 528 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 NECAP2Q9NVZ3 263 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 PLEK2Q9NYT0 353 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 CCDC163A0A0D9SF12 145 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 IGSF23A1L1A6 192 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 H0YL77 283 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 PHF1O43189 567 aaPredicted RBP10.76□□□□□ -0.69
NUP88-201ENST00000225696 CA11O75493 328 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 CELA2AP08217 269 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 S100PP25815 95 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 CHATP28329 748 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 OTX1P32242 354 aaPredicted RBP10.76□□□□□ -0.69
NUP88-201ENST00000225696 RPS10P46783 165 aaKnown RBP10.76□□□□□ -0.69
NUP88-201ENST00000225696 HTR5AP47898 357 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 EWSR1Q01844 656 aaKnown RBP eCLIP10.76□□□□□ -0.69
NUP88-201ENST00000225696 PYY3Q5JQD4 70 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 C9orf152Q5JTZ5 239 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 SOHLH1Q5JUK2 328 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 RHBDD2Q6NTF9 364 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 SPSB3Q6PJ21 355 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 COMMD1Q8N668 190 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
NUP88-201ENST00000225696 ADAMTS20P59510 1910 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 IGLV3-12A0A075B6K2 115 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 NKX2-6A6NCS4 301 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ZNF724A8MTY0 619 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 G3V3Y1 287 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ST8SIA3O43173 380 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 CXCL1P09341 107 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ECI1P42126 302 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 NXPH1P58417 271 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 LSM6P62312 80 aaKnown RBP10.75□□□□□ -0.69
NUP88-201ENST00000225696 H3F3AP84243 136 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 GPR157Q5UAW9 335 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 SYT13Q7L8C5 426 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 KDF1Q8NAX2 398 aaPredicted RBP10.75□□□□□ -0.69
NUP88-201ENST00000225696 TCTEX1D2Q8WW35 142 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 MUCL1Q96DR8 90 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 BOD1Q96IK1 185 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 MAGT1Q9H0U3 335 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ZNF407Q9C0G0 2248 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 GDF9O60383 454 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 NXPH3O95157 252 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 EPHA1P21709 976 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ATP6V0CP27449 155 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 MSX1P28360 303 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 DUSP1P28562 367 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 NTF4P34130 210 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ZNF133P52736 654 aaPredicted RBP10.75□□□□□ -0.69
NUP88-201ENST00000225696 RND3P61587 244 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 KIAA0141Q14154 515 aaPredicted RBP10.75□□□□□ -0.69
NUP88-201ENST00000225696 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
NUP88-201ENST00000225696 PPA1Q15181 289 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 ODF3L1Q8IXM7 274 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 FBXL14Q8N1E6 418 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 LRTM2Q8N967 370 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 SUMF2Q8NBJ7 301 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 OR4D5Q8NGN0 318 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 RASL10BQ96S79 203 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 METTL9Q9H1A3 318 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 SEMA5BQ9P283 1151 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 WNT16Q9UBV4 365 aa10.75□□□□□ -0.69
NUP88-201ENST00000225696 H3BQ15 152 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 ZNHIT1O43257 154 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 AADACP22760 399 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 HIST1H3AP68431 136 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 RUNX1Q01196 453 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 HIST2H3PS2Q5TEC6 136 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 HIST2H3AQ71DI3 136 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 OR2G3Q8NGZ4 309 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 Q8WTZ3 238 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 OR6C1Q96RD1 312 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 TCEAL7Q9BRU2 100 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
NUP88-201ENST00000225696 TMPRSS5Q9H3S3 457 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 C11orf1Q9H5F2 150 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 GLRX2Q9NS18 164 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 CHCHD2Q9Y6H1 151 aaPredicted RBP10.74□□□□□ -0.69
NUP88-201ENST00000225696 WDFY4Q6ZS81 3184 aa10.74□□□□□ -0.69
NUP88-201ENST00000225696 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 PROB1E7EW31 1015 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 HSD17B6O14756 317 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 DKK1O94907 266 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TMEM50AO95807 157 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 MAS1LP35410 378 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 GUCA1AP43080 201 aaPredicted RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 NDUFA6P56556 154 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 ERVFRD-1P60508 538 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 OR2B11Q5JQS5 317 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 CXorf66Q5JRM2 361 aaPredicted RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 ZNF774Q6NX45 483 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms