RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MAGEB3O15480 346 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 KDM4BO94953 1096 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 HAND1O96004 215 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 MAP2K4P45985 399 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 SCGB2A2Q13296 93 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 INSL4Q14641 139 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 SPHARQ15513 63 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 MED22Q15528 200 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 Q499Y3 187 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 BRD3OSQ6XYD6 125 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 PDZD9Q8IXQ8 264 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 Q8IYB0 196 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 FAM185AQ8N0U4 392 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 ASCC1Q8N9N2 400 aaKnown RBP10.44□□□□□ -0.74
LSM5-201ENST00000223084 LHX4Q969G2 390 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 GPER1Q99527 375 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 MS4A7Q9GZW8 240 aaPredicted RBP10.44□□□□□ -0.74
LSM5-201ENST00000223084 HMG20AQ9NP66 347 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 GSTK1Q9Y2Q3 226 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 COL6A5A8TX70 2615 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 CENPVL3A0A0U1RRI6 287 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 TMEM82A0PJX8 343 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 RNF212BA8MTL3 300 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 K7N7A8 449 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 PIN1P1O15428 100 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 ZNF737O75373 536 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 TK1P04183 234 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 CD1AP06126 327 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 CHRM2P08172 466 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 IGFBP3P17936 291 aaPredicted RBP10.43□□□□□ -0.74
LSM5-201ENST00000223084 FPR2P25090 351 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 BDKRB2P30411 391 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 OR3A4PP47883 348 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 PPP3R1P63098 170 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 BDH1Q02338 343 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 ACSM1Q08AH1 577 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 PDCD1Q15116 288 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 KRTAP24-1Q3LI83 254 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
LSM5-201ENST00000223084 DDI2Q5TDH0 399 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 VMO1Q7Z5L0 202 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 Q8N7P7 452 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 SIGLECL1Q8N7X8 197 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 OR10K1Q8NGX5 313 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 ZNF418Q8TF45 676 aaPredicted RBP10.43□□□□□ -0.74
LSM5-201ENST00000223084 TNFAIP8L1Q8WVP5 186 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
LSM5-201ENST00000223084 DERL3Q96Q80 235 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 ZNF184Q99676 751 aaPredicted RBP10.43□□□□□ -0.74
LSM5-201ENST00000223084 FAM192AQ9GZU8 254 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 CHST6Q9GZX3 395 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 TMEM138Q9NPI0 162 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 SIRT7Q9NRC8 400 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 KPTNQ9Y664 436 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 KIAA2026Q5HYC2 2103 aa10.43□□□□□ -0.74
LSM5-201ENST00000223084 DSCAML1Q8TD84 2053 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 MEX3AA1L020 520 aaKnown RBP10.42□□□□□ -0.74
LSM5-201ENST00000223084 SIRPB1O00241 398 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 PSPNO60542 156 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 ALDOBP05062 364 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 HSMCR30P0CW71 290 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 EEF1B2P24534 225 aaKnown RBP10.42□□□□□ -0.74
LSM5-201ENST00000223084 TGFBR2P37173 567 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 RPL31P62899 125 aaKnown RBP10.42□□□□□ -0.74
LSM5-201ENST00000223084 KLRD1Q13241 179 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 ZNF146Q15072 292 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 GPR157Q5UAW9 335 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 TMEM200BQ69YZ2 307 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 C17orf107Q6ZR85 190 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 PRSS48Q7RTY5 328 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 SAXO1Q8IYX7 474 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 ZSCAN4Q8NAM6 433 aaPredicted RBP10.42□□□□□ -0.74
LSM5-201ENST00000223084 SNX22Q96L94 193 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 NR1H4Q96RI1 486 aaPredicted RBP10.42□□□□□ -0.74
LSM5-201ENST00000223084 TMED9Q9BVK6 235 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 SUCNR1Q9BXA5 334 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 NOX4Q9NPH5 578 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 ESM1Q9NQ30 184 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 ING4Q9UNL4 249 aa10.42□□□□□ -0.74
LSM5-201ENST00000223084 TRBV23-1A0A0A0MS06 115 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 A0A1W2PRD5 423 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 A0A1W2PRF3 423 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 A0A1W2PRM7 423 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 SH2D1BO14796 132 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 DENRO43583 198 aaKnown RBP10.41□□□□□ -0.74
LSM5-201ENST00000223084 GPX5O75715 221 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 CDRT1O95170 752 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 OR2H2O95918 312 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 MAS1P04201 325 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 CCL3L1P16619 93 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 FSTP19883 344 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 GABRR1P24046 479 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 ZNF93P35789 620 aaPredicted RBP10.41□□□□□ -0.74
LSM5-201ENST00000223084 PTGFRP43088 359 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 EDDM3BP56851 147 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 HILS1P60008 231 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 ERVFRD-1P60508 538 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 SCN1BQ07699 218 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 EDDM3AQ14507 147 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms