RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 M0R296 226 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 FUT9Q9Y231 359 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 MYOM1P52179 1685 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 TAPBPO15533 448 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 HIST1H1EP10412 219 aaKnown RBP13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 ELFN2Q5R3F8 820 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 CMC2Q9NRP2 79 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 SLCO1C1Q9NYB5 712 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 KCNAB3O43448 404 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 ZNF766Q5HY98 468 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 SDF2Q99470 211 aa13.11□□□□□ -0.31
SPTLC2-201ENST00000216484 ERRFI1Q9UJM3 462 aaPredicted RBP13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 PPT2Q9UMR5 302 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 IGKV3D-15A0A087WSY6 115 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 A0A1W2PRD5 423 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 A0A1W2PRF3 423 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 A0A1W2PRM7 423 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 IGKV3-15P01624 115 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 PRSS2P07478 247 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 OR2W3Q7Z3T1 314 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RASL12Q9NYN1 266 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RBFOX3A6NFN3 312 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 PLAUP00749 431 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 CST4P01036 141 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 HPXP02790 462 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 ZNF137PP52743 207 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 GP2P55259 537 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 Q9N2K0 584 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 TRIOBPQ9H2D6 2365 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 M0QZQ0 153 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 GNG7O60262 68 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RPS27P42677 84 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 AESQ08117 197 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 TMEM131LA2VDJ0 1609 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 B4E171 279 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 HMGN4O00479 90 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 GAB4Q2WGN9 574 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RHBDD2Q6NTF9 364 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 ADAMTSL4Q6UY14 1074 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 SARAFQ96BY9 339 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 SNRNP40Q96DI7 357 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 PFN3P60673 137 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 MRPL54Q6P161 138 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RNF165Q6ZSG1 346 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 ALKBH3Q96Q83 286 aaPredicted RBP13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
SPTLC2-201ENST00000216484 IGKV3D-11A0A0A0MRZ8 115 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 OR5AC1P0C628 307 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 ACSM5Q6NUN0 579 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 OR4C3Q8NH37 302 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 MRPS16Q9Y3D3 137 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 IGHV4-34P06331 123 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 SDHBP21912 280 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 CA6P23280 308 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 TNXAQ16473 311 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 LINC00303Q3SY05 128 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 LRRC75AQ8NAA5 344 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 C3orf80F5H4A9 247 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 FZD9O00144 591 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 TMPRSS2O15393 492 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 LANCL1O43813 399 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 SMPD2O60906 423 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 MPDU1O75352 247 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 MT-CO3P00414 261 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 EPXP11678 715 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 GABRA1P14867 456 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 CLDN15P56746 228 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 DHRS3O75911 302 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 SLC37A2Q8TED4 501 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 LPAR3Q9UBY5 353 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 STAG3L3P0CL85 134 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 PSG5Q15238 335 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 Q8IYB0 196 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 ZNF441Q8N8Z8 693 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 ISOC2Q96AB3 205 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 CES1P1Q9UKY3 287 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 BSXQ3C1V8 233 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 DMRTA2Q96SC8 542 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 HSF4Q9ULV5 492 aa13.09□□□□□ -0.31
SPTLC2-201ENST00000216484 DNAJC25-GNG10A0A024R161 153 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms