RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NRASP01111 189 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 FAM157CP0CG43 387 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 NQO2P16083 231 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 EPHA8P29322 1005 aaPredicted RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 RUNX1Q01196 453 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 FABP9Q0Z7S8 132 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF345Q14585 488 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 PDZD11Q5EBL8 140 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 TMEM268Q5VZI3 342 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 EDAQ92838 391 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 SHDQ96IW2 340 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 NAA11Q9BSU3 229 aaPredicted RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 METTL9Q9H1A3 318 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 CRIM1Q9NZV1 1036 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 RBM7Q9Y580 266 aaKnown RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 KLF2Q9Y5W3 355 aaPredicted RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 HEATR1Q9H583 2144 aaKnown RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 C9J4A7 227 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 MBPP02686 304 aaPredicted RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 HERV-K104P61576 105 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 RPUSD3Q6P087 351 aaKnown RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 PLPPR2Q96GM1 343 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 PRRX2Q99811 253 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 GSN-AS1Q9NRJ2 163 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 ANXA10Q9UJ72 324 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 OSGIN2Q9Y236 505 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 UBE2J1Q9Y385 318 aaPredicted RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 MSTNO14793 375 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 GPM6AP51674 278 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 TAS2R46P59540 309 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
EFNB1-201ENST00000204961 PPA1Q15181 289 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
EFNB1-201ENST00000204961 RARRES2Q99969 163 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 SUCNR1Q9BXA5 334 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 C1orf123Q9NWV4 160 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 GHRLQ9UBU3 117 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 KCNIP3Q9Y2W7 256 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
EFNB1-201ENST00000204961 A0A1W2PPE2 198 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 A0A1W2PPH5 198 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 SSSCA1O60232 199 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 SNAPC5O75971 98 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 UMODP07911 640 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 PPP1CCP36873 323 aaKnown RBP13.1□□□□□ -0.31
EFNB1-201ENST00000204961 PCOLCEQ15113 449 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 EIF2S3LQ2VIR3 472 aaKnown RBP13.1□□□□□ -0.31
EFNB1-201ENST00000204961 C9orf152Q5JTZ5 239 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 OR10AD1Q8NGE0 317 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 RBMXL1Q96E39 390 aaKnown RBP13.1□□□□□ -0.31
EFNB1-201ENST00000204961 CNTNAP3Q9BZ76 1288 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 NMES1Q9C002 83 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 SLC5A7Q9GZV3 580 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF44P15621 663 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 POC1AQ8NBT0 407 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 WFDC1Q9HC57 220 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 RAB18Q9NP72 206 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 PISDQ9UG56 409 aa13.1□□□□□ -0.31
EFNB1-201ENST00000204961 DBX1A6NMT0 343 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 P04436 131 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 HAAOP46952 286 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 RBP2P50120 134 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 CLEC12BQ2HXU8 276 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 NCMAPQ5T1S8 102 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 SLC25A24Q6NUK1 477 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 HAS2Q92819 552 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 CEP192Q8TEP8 1941 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 ACACAQ13085 2346 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF727A8MUV8 499 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 LY86O95711 162 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 AADACP22760 399 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 CLDN15P56746 228 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 PSG4Q00888 419 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 OR2B11Q5JQS5 317 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 CRIP3Q6Q6R5 217 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 ZIC4Q8N9L1 334 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 MED13LQ71F56 2210 aa13.09□□□□□ -0.31
EFNB1-201ENST00000204961 C5orf49A4QMS7 147 aa13.08□□□□□ -0.31
EFNB1-201ENST00000204961 HMGB3O15347 200 aaKnown RBP13.08□□□□□ -0.31
EFNB1-201ENST00000204961 HABP2Q14520 560 aaPredicted RBP13.08□□□□□ -0.31
EFNB1-201ENST00000204961 DHRS7BQ6IAN0 325 aaPredicted RBP13.08□□□□□ -0.31
EFNB1-201ENST00000204961 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.08□□□□□ -0.31
EFNB1-201ENST00000204961 SKA3Q8IX90 412 aa13.08□□□□□ -0.31
EFNB1-201ENST00000204961 OR10D3Q8NH80 312 aa13.08□□□□□ -0.31
EFNB1-201ENST00000204961 PTX4Q96A99 478 aa13.08□□□□□ -0.31
EFNB1-201ENST00000204961 SLC2A9Q9NRM0 540 aa13.08□□□□□ -0.31
EFNB1-201ENST00000204961 DMXL1Q9Y485 3027 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 A0A1B0GTQ1 180 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 NKX2-6A6NCS4 301 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms