RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 BEX5Q5H9J7 111 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 TMEM211Q6ICI0 200 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 BHLHE23Q8NDY6 225 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 SLC30A7Q8NEW0 376 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 HPSE2Q8WWQ2 592 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 RBPMSQ93062 196 aaKnown RBP7.12□□□□□ -1.27
VAMP3-201ENST00000054666 SLAMF9Q96A28 289 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 PHYHIPLQ96FC7 376 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 C2orf50Q96LR7 162 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 SLC25A32Q9H2D1 315 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 ASCL3Q9NQ33 180 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 SDHAF2Q9NX18 166 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 KCNIP3Q9Y2W7 256 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 STARD10Q9Y365 291 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 MPC1Q9Y5U8 109 aa7.12□□□□□ -1.27
VAMP3-201ENST00000054666 TNRC6AQ8NDV7 1962 aaKnown RBP7.11□□□□□ -1.27
VAMP3-201ENST00000054666 TRAV17A0A0B4J275 112 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 FAM221AA4D161 298 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 CRYM-AS1A6NIL9 109 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 OR5B21A6NL26 309 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 J3QW42 95 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 HOXB5P09067 269 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 RPS2P15880 293 aaKnown RBP7.11□□□□□ -1.27
VAMP3-201ENST00000054666 NPBWR2P48146 333 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 PIGPP57054 158 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 S100A10P60903 97 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 MPV17LQ2QL34 196 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 RNFT1Q5M7Z0 435 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 ELP2Q6IA86 826 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 TFAP2EQ6VUC0 442 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 MDP1Q86V88 176 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 TMEM200AQ86VY9 491 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 BATF2Q8N1L9 274 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 FDCSPQ8NFU4 85 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 OR5A2Q8NGI9 324 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 NEK7Q8TDX7 302 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 EXTL1Q92935 676 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 CXorf58Q96LI9 332 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 DECR2Q9NUI1 292 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 PRR13Q9NZ81 148 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 ZNF581Q9P0T4 197 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 TRBV6-7A0A0A0MS04 114 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 NGFP01138 241 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 HOXC12P31275 282 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 GNG3P63215 75 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 SMCO1Q147U7 214 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 PRSS54Q6PEW0 395 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 LINC00596Q86U02 117 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 ZNF573Q86YE8 665 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 SLC38A6Q8IZM9 456 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 CCDC71LQ8N9Z2 235 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 OR5T2Q8NGG2 359 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 BCL2L2Q92843 193 aaPredicted RBP7.11□□□□□ -1.27
VAMP3-201ENST00000054666 PIK3IP1Q96FE7 263 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 WBP1Q96G27 269 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 SYT3Q9BQG1 590 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 OR51B6Q9H340 312 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 PLK3Q9H4B4 646 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 SPACA1Q9HBV2 294 aa7.11□□□□□ -1.27
VAMP3-201ENST00000054666 MSTNO14793 375 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 ZNHIT1O43257 154 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 IGHG3P01860 377 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
VAMP3-201ENST00000054666 FCGR2CP31995 323 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 WNT5AP41221 380 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 PDCD1Q15116 288 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 RGS7BPQ6MZT1 257 aaPredicted RBP7.1□□□□□ -1.27
VAMP3-201ENST00000054666 HAGHLQ6PII5 290 aaPredicted RBP7.1□□□□□ -1.27
VAMP3-201ENST00000054666 DHRS11Q6UWP2 260 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 CCDC36Q8IYA8 594 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 POC1AQ8NBT0 407 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 Q8NFD4 153 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 TRIB1Q96RU8 372 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 NAA60Q9H7X0 242 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 CDH20Q9HBT6 801 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 GSKIPQ9P0R6 139 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 CLCF1Q9UBD9 225 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 LHX6Q9UPM6 363 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 OTOGLQ3ZCN5 2332 aa7.1□□□□□ -1.27
VAMP3-201ENST00000054666 MFSD2BA6NFX1 497 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 SHOXO15266 292 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 DIRAS3O95661 229 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 CRYZL1O95825 349 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 PRKACAP17612 351 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 SRSF6Q13247 344 aaKnown RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RAB32Q13637 225 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 SNTB1Q13884 538 aaKnown RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 IAH1Q2TAA2 248 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 IGF2-ASQ6U949 168 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 GCNT2Q8N0V5 402 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 OR1S1Q8NH92 325 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RTN4IP1Q8WWV3 396 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 OR5P3Q8WZ94 311 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 MOB3AQ96BX8 217 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 SARAFQ96BY9 339 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 MARS2Q96GW9 593 aaKnown RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 OR10C1Q96KK4 312 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 ZNF75AQ96N20 296 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 MICU1Q9BPX6 476 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms