RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 SELEP16581 610 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 NAAAQ02083 359 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 SLC16A14Q7RTX9 510 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 TMEM105Q8N8V8 129 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 MSI2Q96DH6 328 aaKnown RBP9.24□□□□□ -0.93
USP28-201ENST00000003302 HES7Q9BYE0 225 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 NDRG3Q9UGV2 375 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 EDN3P14138 238 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 SULT1A2P50226 295 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 CEBPGP53567 150 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 SLC22A8Q8TCC7 542 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 OIT3Q8WWZ8 545 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 TECTAO75443 2155 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 CCNOP22674 350 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 ZNF84P51523 738 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 POLR2GP62487 172 aaKnown RBP eCLIP9.24□□□□□ -0.93
USP28-201ENST00000003302 TMEM187Q14656 261 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 UQCC3Q6UW78 93 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 SLC35G3Q8N808 338 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 URM1Q9BTM9 101 aaKnown RBP9.24□□□□□ -0.93
USP28-201ENST00000003302 ULBP2Q9BZM5 246 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 SPACA1Q9HBV2 294 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 POLEQ07864 2286 aa9.24□□□□□ -0.93
USP28-201ENST00000003302 A0A0G2JRQ6 117 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 LCATP04180 440 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 CRYGSP22914 178 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 RGS19P49795 217 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 PSG4Q00888 419 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 HLA-BQ31612 363 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 KRBOX4Q5JUW0 171 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 SPEM1Q8N4L4 309 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 MAFAQ8NHW3 353 aaPredicted RBP9.23□□□□□ -0.93
USP28-201ENST00000003302 PAPOLGQ9BWT3 736 aaKnown RBP9.23□□□□□ -0.93
USP28-201ENST00000003302 SYNGR3O43761 229 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 CST7O76096 145 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 AADACP22760 399 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 PEA15Q15121 130 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 LPAL2Q16609 132 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
USP28-201ENST00000003302 NCMAPQ5T1S8 102 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 TMEM182Q6ZP80 229 aaPredicted RBP9.23□□□□□ -0.93
USP28-201ENST00000003302 TMEM217Q8N7C4 229 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 FNDC9Q8TBE3 224 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 ASB13Q8WXK3 278 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 SLAMF9Q96A28 289 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 GLRX2Q9NS18 164 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 PTRH2Q9Y3E5 179 aaKnown RBP9.23□□□□□ -0.93
USP28-201ENST00000003302 A0A1W2PR80 420 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 NKX2-6A6NCS4 301 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 SCTP09683 121 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 COX6A1P12074 109 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 ITGA3P26006 1051 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 CHATP28329 748 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 CTAG1AP78358 180 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 DNASE2BQ8WZ79 361 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 TM2D1Q9BX74 207 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 RARRES3Q9UL19 164 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 ST3GAL6Q9Y274 331 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 CXCL13O43927 109 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 ADAM5Q6NVV9 412 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 PRRG4Q9BZD6 226 aa9.23□□□□□ -0.93
USP28-201ENST00000003302 IGLV3-32A0A0A0MS00 114 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 CBX5P45973 191 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 SKA3Q8IX90 412 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 GJC3Q8NFK1 279 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 OR5T2Q8NGG2 359 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 OR6S1Q8NH40 331 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 EDARADDQ8WWZ3 215 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 PIGCQ92535 297 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 MMP24Q9Y5R2 645 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 IGSF23A1L1A6 192 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 PHF1O43189 567 aaPredicted RBP9.22□□□□□ -0.93
USP28-201ENST00000003302 LIFP15018 202 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 TBPP20226 339 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 TAS2R31P59538 309 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 C3AR1Q16581 482 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 C5orf46Q6UWT4 87 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 CUBNO60494 3623 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 IGKV1-6A0A0C4DH72 117 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 IFITM10A6NMD0 228 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 NPIPA2E9PIF3 369 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 NPIPA3F8WFD2 350 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 OR7C1O76099 320 aaPredicted RBP9.22□□□□□ -0.93
USP28-201ENST00000003302 NGFP01138 241 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 SNCAP37840 140 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 GGNQ86UU5 652 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 FAM86C1Q9NVL1 165 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 TIMM10BQ9Y5J6 103 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 IGHV1-45A0A0A0MS14 117 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 NQO2P16083 231 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 GSK3AP49840 483 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 SUMO3P55854 103 aaPredicted RBP9.22□□□□□ -0.93
USP28-201ENST00000003302 B3GALT5-AS1P59052 145 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 RSU1Q15404 277 aa9.22□□□□□ -0.93
USP28-201ENST00000003302 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms