RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr713Q920G5 324 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Nrif2Q921B4 824 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 NmuQ9QXK8 174 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Hey1Q9WV93 299 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 AireQ9Z0E3 552 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 PthQ9Z0L6 115 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 2410004P03RikA0A087WQY2 205 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Prr32A2AFE9 284 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Aldh3b2E9Q3E1 479 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr430E9Q5F1 317 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Aqp2P56402 271 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 ActbP60710 375 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Rab3aP63011 220 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Actg1P63260 375 aaKnown RBP13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Prr27Q3SYJ2 352 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gpank1Q61858 372 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tox4Q8BU11 619 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cacul1Q8R0X2 377 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Zmynd11Q8R5C8 602 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Slc29a3Q99P65 475 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Chmp1b2Q9CQD4 199 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Rpl14Q9CR57 217 aaKnown RBP13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cnih4Q9CX13 139 aa13.9□□□□□ -0.18
Trim39-203ENSMUST00000113706 Sirpb1bA0A0A6YXN8 397 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm10358A0A1D5RLD8 333 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr1112A2ATA0 318 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 MsmpB1AWI6 139 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Rnaset2aC0HKG5 259 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Rnaset2bC0HKG6 259 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Sirpb1cK7N6K7 397 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Igh-3P01867 404 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 GapdhP16858 333 aaKnown RBP13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Tle3Q08122 772 aaKnown RBP13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Zglp1Q1WG82 266 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 DhhQ61488 396 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pon3Q62087 354 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pif1Q80SX8 650 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Zfp955aQ80XR7 545 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Oxa1lQ8BGA9 433 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Trib3Q8K4K2 354 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 NifkQ91VE6 317 aaKnown RBP13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 QprtQ91X91 299 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm3839S4R1W1 333 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pom121l12A0A1B0GSJ4 278 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Slco5a1E9PVD9 850 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Cd40lgP27548 260 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gng2P63213 71 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Milr1Q3TB92 246 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Selenbp2Q63836 472 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gpr135Q7TQP2 457 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr1031Q7TR87 336 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr285Q7TS17 319 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Zfp947Q8BIQ6 437 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr1100Q8VFM1 321 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr1501Q8VFQ3 315 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 BlvrbQ923D2 206 aaKnown RBP13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Washc3Q9CR27 194 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Tex29Q9DA77 186 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Ndrg3Q9QYF9 375 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Ak3Q9WTP7 227 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Ramp3Q9WUP1 147 aa13.89□□□□□ -0.19
Trim39-203ENSMUST00000113706 Trav8n-2A0A075B633 112 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Slc38a6G3UVW3 457 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Casp16-psI6L890 176 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Sh2b3O09039 548 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Rab6aP35279 208 aaKnown RBP13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pax9P47242 342 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 RelbQ04863 558 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pea15Q62048 130 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Foxb1Q64732 325 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Lsm11Q8BUV6 361 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 CdnfQ8CC36 187 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pcdhga3Q91XY5 928 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Smim3Q99PE5 60 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Dnajc4Q9D844 244 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Ubl3Q9Z2M6 117 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm4858A0A0A6YWS7 318 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 C3ar1O09047 477 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Il1r1P13504 576 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Rce1P57791 329 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pla2g3Q8BZT7 504 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pqlc2Q8C4N4 293 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Neil1Q8K4Q6 389 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr1138Q8VFQ9 311 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Exosc8Q9D753 276 aaKnown RBP13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Rp2Q9EPK2 347 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Six6Q9QZ28 246 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 TprF6ZDS4 2431 aaKnown RBP13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Igkv13-85A0A075B666 115 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm3285A0A1W2P7U0 201 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr424E9Q0Q2 315 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Vmn1r34G3XA52 309 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm8024L7N2E0 100 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Tspan5P62080 268 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 PilrbQ2YFS2 224 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Xlr4cQ3TKR2 215 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Eri1Q7TMF2 345 aaKnown RBP13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gpr119Q7TQP3 335 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr524Q7TRU0 318 aa13.88□□□□□ -0.19
Trim39-203ENSMUST00000113706 Plekha1Q8BUL6 383 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms