RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Igkv5-39A0A0G2JDV4 115 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Gm28729A0A1B0GSW2 409 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 AI182371A2AS37 356 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Alkal1J3QPP8 127 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Ier2P17950 221 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 SrmQ64674 302 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 B430218F22RikQ8BQR5 223 aa13.1□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Igkv17-127A0A0G2JDN5 117 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Nufip2Q5F2E7 692 aaKnown RBP13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Fzd6Q61089 709 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Ikzf5Q8BU00 419 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Clec2hQ8C1T8 218 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Ubtd1Q91WB7 227 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Tmem208Q9CR96 173 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 ManfQ9CXI5 179 aaKnown RBP13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Dctn6Q9WUB4 190 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Gli3Q61602 1583 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Gm5157A0A087WRH8 301 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Olfr282A1L1B4 308 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Vmn1r167G3UW71 315 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 ApelaP0DMC4 54 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Olfr996Q7TRA0 314 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Olfr107Q7TRK4 309 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Q8C4X7 151 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Scgb1b27Q91WB5 92 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Sntb1Q99L88 537 aaKnown RBP13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Q9CWB7 115 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Rnf39A2RT81 352 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Trabd2bB1ATG9 517 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Prdm13E9PZZ1 754 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Bloc1s3Q5U5M8 195 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Galnt6Q8C7U7 622 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Klre1Q8CJC7 226 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Olfr531Q8VGL2 304 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Chrm2Q9ERZ4 466 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Srd5a3Q9WUP4 330 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Tgfbr3O88393 850 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 TigitP86176 249 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Fbxw22Q5XG67 466 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Tm7sf3Q9CRG1 565 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Q9CRW3 126 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Tmem128Q9CZB9 163 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Mmp1bQ9EPL6 463 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Syt6Q9R0N8 511 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Tubgcp6G5E8P0 1769 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Olfr608E9Q564 316 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Ppp1caP62137 330 aaKnown RBP13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Cnrip1Q5M8N0 164 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 St8sia3Q64689 380 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Gm5771Q792Y9 245 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Pik3ip1Q7TMJ8 264 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 LssQ8BLN5 733 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 IqcjQ8BPW0 110 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Zbtb37Q8C3U9 504 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Vmn1r19Q8R2C7 308 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Seh1lQ8R2U0 360 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Ptov1Q91VU8 416 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Cts7Q91ZF2 331 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Pofut1Q91ZW2 393 aa13.09□□□□□ -0.31
Shroom3-202ENSMUST00000113054 Ankrd29D3YVV3 309 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Il5P04401 133 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Cdk2P97377 346 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Lemd1Q14C37 129 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Foxb1Q64732 325 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Gm13757Q7TR17 305 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Aadacl4Q8BM81 407 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Tmem45bQ8VCZ2 278 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Mettl9Q9EPL4 318 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Dll4Q9JI71 686 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Cdc20Q9JJ66 499 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 HgfacQ9R098 653 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Ecm29Q6PDI5 1840 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Col9a3A2ACT7 680 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 B4galnt1Q09200 533 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Fam212bQ80VY2 300 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Crb2Q80YA8 1282 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Sfrp5Q9WU66 314 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Mpzl1Q3TEW6 270 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Tmem123Q91Z22 195 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Cyc1Q9D0M3 325 aaKnown RBP13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Kcnip2Q9JJ69 270 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Upk3aQ9JKX8 287 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Cyhr1Q9QXA1 311 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Phrf1A6H619 1682 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Zfp383A0A087WRR7 490 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Sirpb1bA0A0A6YXN8 397 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Olfr110A2RT31 317 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Sirpb1cK7N6K7 397 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Raet1cO08604 253 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 PhyhO35386 338 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 MgmtP26187 211 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Fkbp2P45878 140 aaKnown RBP13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 1700012B07RikQ3V0S8 276 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Defb46Q4QY34 57 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Trav6-2Q5R1I4 113 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Olfr111Q7TRK1 317 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Sirt4Q8R216 333 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 GrinaQ9ESF4 345 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Ube2dnl1A2AFH1 155 aa13.08□□□□□ -0.32
Shroom3-202ENSMUST00000113054 Tmem215A7E1Z1 235 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms