RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Slc22a30Q96LX3 552 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 DohhQ99LN9 302 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Q9CQT6 229 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Kcnmb4Q9JIN6 210 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tas2r4Q9JKT3 297 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ankrd12G5E893 2041 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Trank1Q8BV79 2999 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fcgr4A0A0B4J1G0 249 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp109A0A0U1RPC5 652 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Sult2a5K7N6K9 285 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1564K7N6V7 318 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Emc8O70378 207 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ca2P00920 260 aaKnown RBP6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Defa-rs1P17533 116 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cxcl5P50228 132 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rab4aP56371 218 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ucp3P56501 308 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 McidasQ3UZ45 379 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr328Q5NCD3 310 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 PmelQ60696 626 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ptpmt1Q66GT5 193 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1045Q7TR80 315 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Sez6Q7TSK2 991 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hs6st2Q80UW0 612 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Stk17bQ8BG48 372 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hspa12aQ8K0U4 675 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr860Q8VFF7 317 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Wasf3Q8VHI6 501 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ubl7Q91W67 380 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Atg5Q99J83 275 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Steap1Q9CWR7 339 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cldnd2Q9D9H2 167 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Serinc1Q9QZI8 453 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1326-ps1A0A140T8J7 311 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 4930563M21RikA0A1L1SUT5 578 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm3727J3QM54 205 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp870J3QMA4 560 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr190K7N5T5 307 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rnf13O54965 381 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fcer1aP20489 250 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 GcgP55095 180 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Lsm5P62322 91 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm813Q3UWK9 176 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hs3st6Q5GFD5 342 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Prss46Q5M8S2 314 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Taar8bQ5QD06 344 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Bloc1s3Q5U5M8 195 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mtcp1Q60945 107 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tex261Q62302 196 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1015Q7TR94 312 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fam98bQ80VD1 429 aaKnown RBP6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Bdh1Q80XN0 343 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Paqr8Q80ZE5 354 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pomt2Q8BGQ4 820 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc22a12Q8CFZ5 553 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Alkbh6Q8K2U2 238 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 FevQ8QZW2 237 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Scgb3a1Q920D7 104 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Sfxn5Q925N0 342 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zmynd19Q9CQG3 227 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ceacam18Q9D871 376 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fzr1Q9R1K5 493 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Med12lQ8BQM9 2157 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Qrich2A0A140LIY9 2337 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr485A0A140LJF5 317 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm13178B1AVU7 408 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Socs1O35716 212 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 RidaP52760 135 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rce1P57791 329 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ube2kP61087 200 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rps27aP62983 156 aaKnown RBP6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Uba52P62984 128 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hist1h3bP84228 136 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Nkx3-2P97503 333 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 GnrhrQ01776 327 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tamm41Q3TUH1 337 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Bud31Q6PGH1 103 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Katnb1Q8BG40 658 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp799Q8BHK4 648 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ss18l1Q8BW22 402 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ubqln3Q8C5U9 658 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 A730049H05RikQ8C940 139 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 HinfpQ8K1K9 503 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1151Q8VFQ8 308 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 PsphQ99LS3 225 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Exosc5Q9CRA8 235 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tm7sf3Q9CRG1 565 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr887Q9EQA6 309 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm15013V9GWY0 266 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cd300ld4A2A7W1 245 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 B1ARW8 110 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp81B8JJZ7 531 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp961E9Q4R5 444 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp988F6VKC7 633 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm21411J3KMS0 136 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hmgn1P18608 96 aaKnown RBP6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 P20040 264 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 SnrpbP27048 231 aaKnown RBP6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Guca2aP33680 116 aa6.09□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pcbp3P57722 371 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms