RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Hprt1P00493 218 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 CamlgP49070 294 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PilrbQ2YFS2 224 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr140Q60878 302 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Klre1Q8CJC7 226 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PtgesQ9JM51 153 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fbp1Q9QXD6 338 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm14325A2AW67 498 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rnf212bD3Z423 297 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Oprd1P32300 372 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Isoc2aP85094 206 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rab42Q0PD08 215 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Agfg2Q80WC7 479 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ntmt1Q8R2U4 223 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Clec2fQ8VI21 196 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rps21Q9CQR2 83 aaKnown RBP15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Emc7Q9EP72 241 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cd40P27512 289 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Slc17a5Q8BN82 495 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mcts2Q9CQ21 181 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm14288E9Q9W0 88 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 4930522L14RikE9QAG4 666 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ifna6P07350 189 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rbp4Q00724 201 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Slc7a15Q50E62 488 aa15.09■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ube2dnl2A2AFH2 155 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 HgdO09173 445 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rack1P68040 317 aaKnown RBP15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Q8C4P0 716 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Acaa1bQ8VCH0 424 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Acaa1aQ921H8 424 aaKnown RBP15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cml1Q9JIZ0 222 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mmp24Q9R0S2 618 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Adam34A2RSG8 714 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Tmprss9P69525 1065 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Lrrtm1Q8K377 522 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dhrs4Q99LB2 279 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sgo1Q9CXH7 517 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 ManfQ9CXI5 179 aaKnown RBP15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr122W4VSP0 330 aa15.08■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cnot1Q6ZQ08 2375 aaKnown RBP15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Gm28285A0A087WQ54 102 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Pdzd11Q9CZG9 140 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Jmjd6Q9ERI5 403 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Sstr5O08858 362 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Tbpl2Q6SJ95 350 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Fbxw14Q8C2Y5 466 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Vmn1r202Q8R259 302 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Aph1cQ9DCZ9 258 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Prr23a2D3YWX5 253 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Lrrc61Q8R2R5 259 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Slc7a12Q8VIE6 465 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr199F6ZUS0 308 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Tesk1O70146 627 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 C5ar1P30993 351 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Nkx2-6P43688 289 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Thap4Q6P3Z3 569 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr963Q7TRA9 311 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr43Q7TRX1 313 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr403Q7TRX2 313 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Foxj3Q8BUR3 623 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Ceacam13Q9DAT7 263 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Plekha2Q9ERS5 425 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Tnrc6cQ3UHC0 1690 aaKnown RBP15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Vmn1r138D3YTY2 306 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Gm8693E9PW18 306 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Gm4498K9J7G4 306 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Vmn1r118L7N273 306 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Zfp1P08042 402 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Morn4Q6PGF2 146 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Crlf2Q8CII9 359 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 B3gnt8Q8R3I9 389 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Arrdc1Q99KN1 434 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Gm11214V9GX06 183 aa15.08■□□□□ 0
Ccdc88a-201ENSMUST00000040182 D3Ertd254eA0A0G2JEM5 796 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr1491Q8VEZ5 319 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 B3galnt1Q920V1 331 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Vmn1r90A0A087WR36 309 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Ighv1-24A0A0A6YY24 117 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 H2-M1F7CXU4 344 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 PkiaP63248 76 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr478Q8VG04 314 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr685A0A1L1SVG7 331 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Cd300cA2A7V7 229 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr585E9PXW4 318 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 IghgP01863 330 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Gja4P28235 333 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Clec7aQ6QLQ4 244 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr497Q8VG08 314 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr583Q8VG25 319 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Arpc1bQ9WV32 372 aaKnown RBP15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Exph5Q0VAV2 1960 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 ArntP53762 791 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Znf628Q8CJ78 1038 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Aloxe3Q9WV07 711 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Olfr1438-ps1A0A140LHS9 319 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Adprhl1Q8BGK2 353 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Skint9A7TZG3 319 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Pcsk6F6XJP7 959 aa15.07■□□□□ 0
Ccdc88a-201ENSMUST00000040182 Raet1bO08603 253 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms