RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Drd3P30728 446 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 FauP35545 74 aaKnown RBP16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Atf4Q06507 349 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vax1Q2NKI2 338 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm826Q3UQ74 109 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Bbs12Q5SUD9 708 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 CstbQ62426 98 aaKnown RBP16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tubg2Q8VCK3 451 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Naa40Q8VE10 237 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Rtl8cQ9D6I0 112 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 S100a16Q9D708 124 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Trbv12-1A0A0B4J1H0 124 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm21761J3QK00 171 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn2r30K7N5W1 852 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn2r47K7N709 852 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ccdc36Q6PDM4 574 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Sult1c1Q80VR3 304 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn1r229Q8R2A9 306 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Elac1Q8VEB6 362 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr340Q8VGL0 312 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tmem50bQ9D1X9 158 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr887Q9EQA6 309 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fgf16Q9ESL8 207 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Akip1Q9JJR5 212 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Brca2P97929 3329 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 FggyA2AJL3 552 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fbxw25F7C9P2 466 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Sult2a4L7N245 285 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ascl4M0QW46 144 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Klk1b3P00756 261 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Znf271P15620 580 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Slc22a14Q497L9 629 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Pld6Q5SWZ9 221 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 PnkdQ69ZP3 385 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 March1Q6NZQ8 289 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Zfp286Q8C0E6 519 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Dcun1d4Q8CCA0 292 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Entpd8Q8K0L2 497 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 SccpdhQ8R127 429 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Il34Q8R1R4 235 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr497Q8VG08 314 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Serpinb1bQ8VHP7 382 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Q9DAS2 200 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 PbkQ9JJ78 330 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 LitafQ9JLJ0 161 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fxyd1Q9Z239 92 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tex45G3XA23 500 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Cbr2P08074 244 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm9125P0DMR6 365 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 GzmdP11033 252 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 FgrP14234 517 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Il2rgP34902 369 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ccr1l1P51676 356 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Sox19Q62249 55 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Xkr8Q8C0T0 401 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 BmperQ8CJ69 685 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Znf768Q8R0T2 568 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fam110cQ8VE94 421 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Mrps28Q9CY16 186 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 HikeshiQ9DD02 197 aa16.55■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Chd7A2AJK6 2986 aaKnown RBP16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr1089A0A1L1SRK6 311 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Zfp944E9PUS4 492 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr419E9Q0Y7 313 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr608E9Q564 316 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm20834J3QM72 227 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 EhfO70273 300 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Serf1O88892 62 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Klk1b11P15946 261 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 MgmtP26187 211 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 JPT1P97825 154 aaKnown RBP16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Zer1Q80ZJ6 779 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Actbl2Q8BFZ3 376 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 RhofQ8BYP3 211 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Las2Q8CB14 526 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Mrpl48Q8JZS9 211 aaKnown RBP16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn1r35Q8R2E2 296 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr995Q8VF74 315 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Elp5Q99L85 300 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Nkain1Q9D035 207 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fam96bQ9D187 163 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Dnajc4Q9D844 244 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ap4m1Q9JKC7 449 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Slc37a2Q9WU81 501 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Wif1Q9WUA1 379 aa16.54■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tex38A2A8T7 201 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Mn1D3YWE6 1297 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gprin2D3Z1D7 455 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm10260F6YVP7 152 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 B3galt1O54904 326 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fli1P26323 452 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tmem211Q3UUA0 195 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr1357Q7TQU7 313 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tacstd2Q8BGV3 317 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Esco2Q8CIB9 592 aaKnown RBP16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 BphlQ8R164 291 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr1324Q8VEU7 332 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Cst14Q8VII3 130 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 2210010C04RikQ9CPN9 247 aaKnown RBP16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Frem2Q6NVD0 3160 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms