RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 CCL2P13500 99 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 APLNRP35414 380 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 MAB21L1Q13394 359 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 INSL4Q14641 139 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 SPCS2Q15005 226 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 TRAM1Q15629 374 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 CTF1Q16619 201 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 ODF4Q2M2E3 257 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 SNAI3Q3KNW1 292 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 TIMM50Q3ZCQ8 353 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 YIF1BQ5BJH7 314 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 COLCA1Q6ZS62 124 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 RDH10Q8IZV5 341 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 PAQR4Q8N4S7 273 aaPredicted RBP6.84□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF676Q8N7Q3 588 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 OR8B12Q8NGG6 310 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 OR52H1Q8NGJ2 320 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 OR13C5Q8NGS8 318 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF420Q8TAQ5 688 aaPredicted RBP6.84□□□□□ -1.32
SCARB2-220ENST00000640076 ABHD4Q8TB40 342 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 NDNFQ8TB73 568 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 RAB2BQ8WUD1 216 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 ISOC1Q96CN7 298 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 COMMD4Q9H0A8 199 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 PPIL3Q9H2H8 161 aaKnown RBP6.84□□□□□ -1.32
SCARB2-220ENST00000640076 STUB1Q9UNE7 303 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 FAM96BQ9Y3D0 163 aa6.84□□□□□ -1.32
SCARB2-220ENST00000640076 ROS1P08922 2347 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 TRDV1A0A1B0GX56 115 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 CCDC160A6NGH7 325 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 F5H697 171 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF701M0R085 212 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-220ENST00000640076 SC5DO75845 299 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 HLA-DPB1P04440 258 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 ISG15P05161 165 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 CECR9P0C854 216 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 SRMP19623 302 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 CCNOP22674 350 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 TBC1D28Q2M2D7 210 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 SPANXN2Q5MJ10 180 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 TMEM91Q6ZNR0 172 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 GDPGP1Q6ZNW5 385 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 OR51A4Q8NGJ6 313 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 OR10AC1Q8NH08 325 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 ITLN2Q8WWU7 325 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-220ENST00000640076 DGCR14Q96DF8 476 aaKnown RBP6.83□□□□□ -1.32
SCARB2-220ENST00000640076 EXOSC4Q9NPD3 245 aaKnown RBP6.83□□□□□ -1.32
SCARB2-220ENST00000640076 KCNJ16Q9NPI9 418 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 NPAP1Q9NZP6 1156 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 RSL24D1Q9UHA3 163 aaKnown RBP6.83□□□□□ -1.32
SCARB2-220ENST00000640076 SSR3Q9UNL2 185 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 HCFC1P51610 2035 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 COL12A1Q99715 3063 aa6.83□□□□□ -1.32
SCARB2-220ENST00000640076 IGHV1-18A0A0C4DH31 117 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 A0A1B0GTI1 187 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 LOC107986453A0A1B0GWG9 222 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 LOC390937A0A1W2PQ73 354 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 UBE2QL1A1L167 161 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 H3BMQ9 156 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 TRIM77I1YAP6 450 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 P2RY10O00398 339 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 GABRPO00591 440 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 IGLV3-1P01715 115 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 MBP02144 154 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 PPP3CBP16298 524 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 FGF9P31371 208 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF83P51522 516 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 NCS1P62166 190 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 LSM3P62310 102 aaKnown RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 TFF3Q07654 80 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 ACSM3Q53FZ2 586 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 TMEM244Q5VVB8 128 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 XKRXQ6PP77 449 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 SSX8Q7RTT4 187 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF101Q8IZC7 436 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF808Q8N4W9 903 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 NUDT10Q8NFP7 164 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 OR1J2Q8NGS2 313 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 OR51E1Q8TCB6 317 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 GPR148Q8TDV2 347 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 C12orf43Q96C57 262 aaKnown RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 NUDT11Q96G61 164 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 OR14A2Q96R54 314 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 RGCCQ9H4X1 137 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 SP140LQ9H930 580 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 GPR84Q9NQS5 396 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 TXNL4BQ9NX01 149 aaKnown RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 RALYQ9UKM9 306 aaKnown RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 HHLA2Q9UM44 414 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 DHDHQ9UQ10 334 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 ABCA4P78363 2273 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 TRBV5-5A0A0J9YX44 114 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 H3BSH0 61 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 GATBO75879 557 aaKnown RBP6.82□□□□□ -1.32
SCARB2-220ENST00000640076 NGFP01138 241 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 INHBBP09529 407 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 CCL1P22362 96 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 TGFBR1P36897 503 aa6.82□□□□□ -1.32
SCARB2-220ENST00000640076 MAGEB1P43366 347 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms