RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 Q6ZRU5 148 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 CA5BP1Q8WTZ4 195 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 ING5Q8WYH8 240 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 SMIM8Q96KF7 97 aa0.73□□□□□ -2.29
CCDC7-211ENST00000638889 H3BN98 237 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 CRTAPO75718 401 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-211ENST00000638889 HLA-AP01891 365 aaKnown RBP0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ATP6V0D1P61421 351 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 YWHAEP62258 255 aaKnown RBP0.72□□□□□ -2.29
CCDC7-211ENST00000638889 PAFAH1B2P68402 229 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 SSX1Q16384 188 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 TNXAQ16473 311 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 BCL2A1Q16548 175 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 TTC32Q5I0X7 151 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 CLLU1OSQ5K130 101 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ZNF767PQ75MW2 155 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 VTCN1Q7Z7D3 282 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 C2orf15Q8WU43 125 aaKnown RBP0.72□□□□□ -2.29
CCDC7-211ENST00000638889 TMEM234Q8WY98 164 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 PYURFQ96I23 114 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 BPIFA3Q9BQP9 254 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 CXCL16Q9H2A7 254 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ASB7Q9H672 318 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 LYRM4Q9HD34 91 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 MRPS30Q9NP92 439 aaKnown RBP0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ZC4H2Q9NQZ6 224 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ADA2Q9NZK5 511 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 OR5V1Q9UGF6 321 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 CCL26Q9Y258 94 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ORC6Q9Y5N6 252 aa0.72□□□□□ -2.29
CCDC7-211ENST00000638889 ZNF706Q9Y5V0 76 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-211ENST00000638889 A0A075B6Q4 140 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 IGKV2-29A2NJV5 120 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-211ENST00000638889 ZNF860A6NHJ4 632 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 SLC22A20A6NK97 555 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 SNX4O95219 450 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 CLDN6P56747 220 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 CLDN18P56856 261 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 IRF8Q02556 426 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 DNAJC3Q13217 504 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 RCN1Q15293 331 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 TMEM241Q24JQ0 296 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 NOXRED1Q6NXP6 359 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 INO80EQ8NBZ0 244 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-211ENST00000638889 UBA3Q8TBC4 463 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 TSGA10Q9BZW7 698 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 KLF12Q9Y4X4 402 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 INSIG2Q9Y5U4 225 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 COL4A2P08572 1712 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 GBF1Q92538 1859 aa0.71□□□□□ -2.3
CCDC7-211ENST00000638889 SHANK3Q9BYB0 1731 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 RP1L1Q8IWN7 2480 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-211ENST00000638889 A0A0J9YYE9 177 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 A6NED7 52 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TRDMT1O14717 391 aaKnown RBP0.7□□□□□ -2.3
CCDC7-211ENST00000638889 SIVA1O15304 175 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 COX7A2P2O60397 106 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 DHRS3O75911 302 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 RAB36O95755 333 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TRBC1P01850 177 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 HTR2BP41595 481 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 MAGEA6P43360 314 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 KRTAP10-4P60372 401 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TMEM176BQ3YBM2 270 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-211ENST00000638889 PYCR3Q53H96 274 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TTMPQ5BVD1 217 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TPRG1LQ5T0D9 272 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 CLEC19AQ6UXS0 136 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 LINC00596Q86U02 117 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 BBS5Q8N3I7 341 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 CCDC148Q8NFR7 591 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 OR5C1Q8NGR4 320 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 GPR119Q8TDV5 335 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 ZNF625Q96I27 306 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TMED9Q9BVK6 235 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 PRSS16Q9NQE7 514 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 NMRK1Q9NWW6 199 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 TBC1D24Q9ULP9 559 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 HSPE1-MOB4S4R3N1 261 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 NOS1P29475 1434 aa0.7□□□□□ -2.3
CCDC7-211ENST00000638889 NUP205Q92621 2012 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 DOCK10Q96BY6 2186 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 LOC389332A0A1B0GUA5 103 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 LRRIQ4A6NIV6 560 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 KNCNA6PVL3 124 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 C17orf98A8MV24 154 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 DFFAO00273 331 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 PDYNP01213 254 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 ZNF404Q494X3 552 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 CDNFQ49AH0 187 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 N4BP2L1Q5TBK1 243 aaPredicted RBP0.69□□□□□ -2.3
CCDC7-211ENST00000638889 THOC7Q6I9Y2 204 aaKnown RBP0.69□□□□□ -2.3
CCDC7-211ENST00000638889 DEFB119Q8N690 84 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 ZFAND1Q8TCF1 268 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 ISOC2Q96AB3 205 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 METTL26Q96S19 204 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 C11orf70Q9BRQ4 267 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 TFR2Q9UP52 801 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 SLC7A11Q9UPY5 501 aa0.69□□□□□ -2.3
CCDC7-211ENST00000638889 TRBV24-1A0A075B6N3 115 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms