RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CYCSP99999 105 aaKnown RBP18.55■□□□□ 0.56
CLN6-224ENST00000638076 PLP2Q04941 152 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 SRSF6Q13247 344 aaKnown RBP18.55■□□□□ 0.56
CLN6-224ENST00000638076 ST8SIA2Q92186 375 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 STARD10Q9Y365 291 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 FAM221AA4D161 298 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 MPTX1A8MV57 137 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 NKX2-8O15522 239 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 BCL2L11O43521 198 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 ECI1P42126 302 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 SOX8P57073 446 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 RGS7BPQ6MZT1 257 aaPredicted RBP18.54■□□□□ 0.56
CLN6-224ENST00000638076 CCDC28AQ8IWP9 274 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 ZDHHC11Q9H8X9 412 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 PQLC2LA1A4F0 135 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 SLC22A20A6NK97 555 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 PMP22Q01453 160 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 HIKESHIQ53FT3 197 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 INO80EQ8NBZ0 244 aaPredicted RBP18.54■□□□□ 0.56
CLN6-224ENST00000638076 OR5M9Q8NGP3 310 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 WBP1Q96G27 269 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 FGF23Q9GZV9 251 aaPredicted RBP18.54■□□□□ 0.56
CLN6-224ENST00000638076 NECAP2Q9NVZ3 263 aa18.54■□□□□ 0.56
CLN6-224ENST00000638076 ZNF629Q9UEG4 869 aaPredicted RBP18.54■□□□□ 0.56
CLN6-224ENST00000638076 TTC28Q96AY4 2481 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 hCG_1807616A0A1W2PRN6 198 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 KCNAB3O43448 404 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 SS18L1O75177 396 aaPredicted RBP18.53■□□□□ 0.56
CLN6-224ENST00000638076 PDCD6O75340 191 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 ZNF250P15622 560 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 TNFSF10P50591 281 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 HPSE2Q8WWQ2 592 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 LIME1Q9H400 295 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 METTL8Q9H825 291 aaKnown RBP18.53■□□□□ 0.56
CLN6-224ENST00000638076 CACNA1HO95180 2353 aa18.53■□□□□ 0.56
CLN6-224ENST00000638076 IL18BPO95998 194 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 PTGER4P35408 488 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 GPM6AP51674 278 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 ZDHHC23Q8IYP9 409 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 DMRTA2Q96SC8 542 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 OR7C1O76099 320 aaPredicted RBP18.52■□□□□ 0.56
CLN6-224ENST00000638076 HAAOP46952 286 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 LUMP51884 338 aaPredicted RBP18.52■□□□□ 0.56
CLN6-224ENST00000638076 FBXW9Q5XUX1 488 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 OR1K1Q8NGR3 316 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 RBPMSQ93062 196 aaKnown RBP18.52■□□□□ 0.56
CLN6-224ENST00000638076 DECR2Q9NUI1 292 aa18.52■□□□□ 0.56
CLN6-224ENST00000638076 ZNF205O95201 554 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 CCL11P51671 97 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 DAZAP2Q15038 168 aaPredicted RBP18.51■□□□□ 0.55
CLN6-224ENST00000638076 CEACAM21Q3KPI0 293 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 DCUN1D4Q92564 292 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 MARS2Q96GW9 593 aaKnown RBP18.51■□□□□ 0.55
CLN6-224ENST00000638076 OR10C1Q96KK4 312 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 ZNF471Q9BX82 626 aaPredicted RBP18.51■□□□□ 0.55
CLN6-224ENST00000638076 ZNF442Q9H7R0 627 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 CST4P01036 141 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 IFNA2P01563 188 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 CTSDP07339 412 aaPredicted RBP18.51■□□□□ 0.55
CLN6-224ENST00000638076 BCL3P20749 454 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 FUT3P21217 361 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 CLN3Q13286 438 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 SLC22A25Q6T423 547 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 DHRS11Q6UWP2 260 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 SLAMF9Q96A28 289 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 ZNF75AQ96N20 296 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 RNF126Q9BV68 326 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 C1QTNF6Q9BXI9 259 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 REG4Q9BYZ8 158 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 SDHAF2Q9NX18 166 aa18.51■□□□□ 0.55
CLN6-224ENST00000638076 HOXB5P09067 269 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 APLNRP35414 380 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 PDZD9Q8IXQ8 264 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 RELL2Q8NC24 303 aaPredicted RBP18.5■□□□□ 0.55
CLN6-224ENST00000638076 BHLHE23Q8NDY6 225 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 MED9Q9NWA0 146 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 ARHGAP21Q5T5U3 1957 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 SGPP2Q8IWX5 399 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 Q8NFD4 153 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 FDCSPQ8NFU4 85 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 TOMM40LQ969M1 308 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 ASCL3Q9NQ33 180 aa18.5■□□□□ 0.55
CLN6-224ENST00000638076 TRBV6-7A0A0A0MS04 114 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 MFSD2BA6NFX1 497 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 H0YIZ8 118 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 SHOXO15266 292 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 RBMXP38159 391 aaKnown RBP18.49■□□□□ 0.55
CLN6-224ENST00000638076 WNT5AP41221 380 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 OR1S1Q8NH92 325 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 BCL2L2Q92843 193 aaPredicted RBP18.49■□□□□ 0.55
CLN6-224ENST00000638076 OR51B6Q9H340 312 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 ZNF286AQ9HBT8 521 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 C12orf4Q9NQ89 552 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 LOC400499M0QZD8 3231 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 TEX13DA0A0J9YY54 714 aaPredicted RBP18.49■□□□□ 0.55
CLN6-224ENST00000638076 CD300LBA8K4G0 201 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 ZNF732B4DXR9 585 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 PLEKHN1Q494U1 663 aaPredicted RBP18.49■□□□□ 0.55
CLN6-224ENST00000638076 Q6ZPA2 131 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 C2orf50Q96LR7 162 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms