RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TIMM23O14925 209 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 SLC16A6O15403 523 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 INMTO95050 263 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 KIR3DL2P43630 455 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 ISL1P61371 349 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 COL10A1Q03692 680 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 ZSCAN4Q8NAM6 433 aaPredicted RBP15.48■□□□□ 0.07
CLN6-213ENST00000636212 LINC01006Q8NI28 216 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 EMG1Q92979 244 aaKnown RBP15.48■□□□□ 0.07
CLN6-213ENST00000636212 Q96MT0 163 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 MTCH1Q9NZJ7 389 aa15.48■□□□□ 0.07
CLN6-213ENST00000636212 J3QLW9 94 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 M0QZ24 198 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 ISG15P05161 165 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 RPSAP08865 295 aaKnown RBP15.47■□□□□ 0.07
CLN6-213ENST00000636212 PIPP12273 146 aaPredicted RBP15.47■□□□□ 0.07
CLN6-213ENST00000636212 ZNF19P17023 458 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 MTCP1P56278 107 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 EDDM3BP56851 147 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 LHFPL2Q6ZUX7 228 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 RDH10Q8IZV5 341 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 SSX3Q99909 188 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 HHLA2Q9UM44 414 aa15.47■□□□□ 0.07
CLN6-213ENST00000636212 IGKV1-27A0A075B6S5 117 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 H3BUX3 64 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 ATF1P18846 271 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 COX7A1P24310 79 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 POU3F4P49335 361 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 CCR9P51686 369 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 OR12D2P58182 307 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 HCP5Q6MZN7 132 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 FDX2Q6P4F2 183 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 Q6ZSV7 163 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 UTS2BQ765I0 119 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 ZNF676Q8N7Q3 588 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 OR13C3Q8NGS6 347 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 FGGYQ96C11 551 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 C4orf36Q96KX1 117 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 SNX22Q96L94 193 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 CITED1Q99966 193 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 PPA2Q9H2U2 334 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 C16orf95Q9H693 158 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 RAB18Q9NP72 206 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 FRRS1LQ9P0K9 344 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 EXOGQ9Y2C4 368 aaKnown RBP15.46■□□□□ 0.07
CLN6-213ENST00000636212 PCDHGB5Q9Y5G0 923 aa15.46■□□□□ 0.07
CLN6-213ENST00000636212 FADS2O95864 444 aaKnown RBP15.45■□□□□ 0.06
CLN6-213ENST00000636212 CCL3L1P16619 93 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 AZGP1P25311 298 aaKnown RBP15.45■□□□□ 0.06
CLN6-213ENST00000636212 PEX2P28328 305 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 ZNF273Q14593 569 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 AANATQ16613 207 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 LRRC75BQ2VPJ9 315 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 ZBTB49Q6ZSB9 765 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 OR8H2Q8N162 312 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 DTX3Q8N9I9 347 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 OR13D1Q8NGV5 346 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 PPP1R35Q8TAP8 253 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 SPSB1Q96BD6 273 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 ADAT3Q96EY9 351 aaPredicted RBP15.45■□□□□ 0.06
CLN6-213ENST00000636212 MEGF9Q9H1U4 602 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 TCF7L1Q9HCS4 588 aa15.45■□□□□ 0.06
CLN6-213ENST00000636212 hADV38S2A0JD32 116 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 J3QRE1 110 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 TSPAN9O75954 239 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 CLPXO76031 633 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 HAND1O96004 215 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 RBP4P02753 201 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 ZNF728P0DKX0 622 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 GABRR1P24046 479 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 ZNF91Q05481 1191 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 MEF2CQ06413 473 aaPredicted RBP15.44■□□□□ 0.06
CLN6-213ENST00000636212 SRSF4Q08170 494 aaKnown RBP15.44■□□□□ 0.06
CLN6-213ENST00000636212 MRPL28Q13084 256 aaKnown RBP15.44■□□□□ 0.06
CLN6-213ENST00000636212 GALEQ14376 348 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 ZNF782Q6ZMW2 699 aaPredicted RBP15.44■□□□□ 0.06
CLN6-213ENST00000636212 FAM58AQ8N1B3 248 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 LGALS12Q96DT0 336 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 OPALINQ96PE5 141 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 MBOAT4Q96T53 435 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 ALG8Q9BVK2 526 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 SEBOXQ9HB31 216 aaPredicted RBP15.44■□□□□ 0.06
CLN6-213ENST00000636212 S100A14Q9HCY8 104 aa15.44■□□□□ 0.06
CLN6-213ENST00000636212 TRBV2A0A0J9YWF9 115 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 C17orf98A8MV24 154 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 F8VVB4 439 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 F8VWA3 439 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 ZNF737O75373 536 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 DBTP11182 482 aaKnown RBP15.43■□□□□ 0.06
CLN6-213ENST00000636212 PRKACAP17612 351 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 BMXP51813 675 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 NANOS3P60323 173 aaKnown RBP15.43■□□□□ 0.06
CLN6-213ENST00000636212 ALKBH1Q13686 389 aaKnown RBP15.43■□□□□ 0.06
CLN6-213ENST00000636212 EDDM3AQ14507 147 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 GRK1Q15835 563 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 SPIN3Q5JUX0 258 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 LIAT1Q6ZQX7 453 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 LHFPL3Q86UP9 236 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 SYS1Q8N2H4 156 aa15.43■□□□□ 0.06
CLN6-213ENST00000636212 FOXRED1Q96CU9 486 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms