RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 VPS29Q9UBQ0 182 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 DKKL1Q9UK85 242 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 TMCO1Q9UM00 188 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PRPF19Q9UMS4 504 aaKnown RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SNX24Q9Y343 169 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 IFT52Q9Y366 437 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC25A15Q9Y619 301 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 NPTNQ9Y639 398 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 IGHV3-35A0A0C4DH35 117 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 A0A1B0GWB2 263 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 A0A1W2PPE3 182 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 OR5H1A6NKK0 313 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF705EA8MWA4 302 aaPredicted RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 E7EQL1 145 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 E9PBE3 544 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SULT2B1O00204 365 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 TNFSF11O14788 317 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 OR10H3O60404 316 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ERLIN1O75477 346 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 DIRAS1O95057 198 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 KCNK2O95069 426 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 DUSP14O95147 198 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 LYPD3O95274 346 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 LALBAP00709 142 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 GUSBP08236 651 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 TACSTD2P09758 323 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CSF3P09919 207 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 GFAPP14136 432 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC25A16P16260 332 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 RPS4Y1P22090 263 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 FGF9P31371 208 aaPredicted RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 GCKP35557 465 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 DAP3P51398 398 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 P2RY4P51582 365 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CCNG1P51959 295 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ATP1B3P54709 279 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 MRPS25P82663 173 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 H3F3AP84243 136 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 C2orf54Q08AI8 447 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 FUT5Q11128 374 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 IFT88Q13099 833 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SELENBP1Q13228 472 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SKP2Q13309 424 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 TOMM34Q15785 309 aaPredicted RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC22A6Q4U2R8 563 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 XKR7Q5GH72 579 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 TIMM23BQ5SRD1 257 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CPTPQ5TA50 214 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF544Q6NX49 715 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 TIFABQ6ZNK6 161 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 C3orf62Q6ZUJ4 267 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SSX8Q7RTT4 187 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 H2BFWTQ7Z2G1 175 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 MARCH3Q86UD3 253 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF433Q8N7K0 673 aaPredicted RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ARIH2OSQ8N7S6 290 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 WDR31Q8NA23 367 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SPATA4Q8NEY3 305 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 OR4K17Q8NGC6 315 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 OR1L4Q8NGR5 311 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 GPR119Q8TDV5 335 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ZFP90Q8TF47 636 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CDKL2Q92772 493 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 EXOSC8Q96B26 276 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 C10orf35Q96D05 121 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 KCNA7Q96RP8 456 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 IL4I1Q96RQ9 567 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CCT8L2Q96SF2 557 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 STACQ99469 402 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 NAPGQ99747 312 aaPredicted RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 MRPL57Q9BQC6 102 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 FAIM2Q9BWQ8 316 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 EBPLQ9BY08 206 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 RACGAP1Q9H0H5 632 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SLITRK2Q9H156 845 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CDC42EP4Q9H3Q1 356 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ELOVL6Q9H5J4 265 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC7A10Q9NS82 523 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 CBLN4Q9NTU7 201 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 TAS2R9Q9NYW1 312 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 WARS2Q9UGM6 360 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 PSME2Q9UL46 239 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 MCTS1Q9ULC4 181 aaKnown RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 PPIAL4AQ9Y536 164 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 SAR1BQ9Y6B6 198 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF780BQ9Y6R6 833 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 NUP214P35658 2090 aaPredicted RBP1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 WNK1Q9H4A3 2382 aa1.85□□□□□ -2.11
SMARCB1-208ENST00000634926 HECTD4Q9Y4D8 3996 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 DNAH9Q9NYC9 4486 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 HEATR1Q9H583 2144 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PPIAL4EA0A075B759 164 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ARPC4-TTLL3A0A0A6YYG9 625 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 IGHV3-15A0A0B4J1V0 119 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 A0A1W2PP18 115 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 DHRS7CA6NNS2 312 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 SRRM5B3KS81 715 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 TRDCB7Z8K6 153 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NDUFS8O00217 210 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms