RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CD2P06729 351 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 LIPFP07098 398 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 MUC1P15941 1255 aaPredicted RBP12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 PRKACBP22694 351 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 GLRA1P23415 457 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 NPY4RP50391 375 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 SLC35A2P78381 396 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 PDCD1Q15116 288 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 METTL11BQ5VVY1 283 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 TMEM86BQ8N661 226 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 RPS4Y2Q8TD47 263 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 GPR148Q8TDV2 347 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 AQP3Q92482 292 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 LHX4Q969G2 390 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 SPSB1Q96BD6 273 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 C12orf43Q96C57 262 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 CTSZQ9UBR2 303 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 PCDHGB5Q9Y5G0 923 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
SNRNP48-203ENST00000634363 OGG1O15527 345 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 RGS10O43665 173 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 LALBAP00709 142 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 ATF1P18846 271 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 CRHBPP24387 322 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 RBP2P50120 134 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 ARF6P62330 175 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 TAF9Q16594 264 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 RNLSQ5VYX0 342 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 ASPHD2Q6ICH7 369 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 FAM90A1Q86YD7 464 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 C1QL4Q86Z23 238 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 SERPINA12Q8IW75 414 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 NANOGP1Q8N7R0 232 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 ZFP41Q8N8Y5 198 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 PNLDC1Q8NA58 520 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 ZNF485Q8NCK3 441 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 OR5D14Q8NGL3 314 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 OR13C9Q8NGT0 318 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 DYRK2Q92630 601 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 CDCA4Q9BXL8 241 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 CCDC90BQ9GZT6 254 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 PAK1IP1Q9NWT1 392 aaPredicted RBP12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 ZNF281Q9Y2X9 895 aa12.82□□□□□ -0.36
SNRNP48-203ENST00000634363 IGHV1-69DA0A0B4J2H0 117 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 PNMA8CA0A1B0GUJ8 204 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 NKX6-3A6NJ46 265 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 GPR137BO60478 399 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 IGHV1-69P01742 117 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 MMP9P14780 707 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 AZGP1P25311 298 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 SOX2P48431 317 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 ATP1B3P54709 279 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 MTCP1P56278 107 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 DMKNQ6E0U4 476 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 LINC01006Q8NI28 216 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 SGCDQ92629 289 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 GHSRQ92847 366 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 PKIBQ9C010 78 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 WDR13Q9H1Z4 485 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 ZCCHC4Q9H5U6 513 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 SMURF1Q9HCE7 757 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 TCF7L1Q9HCS4 588 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 SIRT4Q9Y6E7 314 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 WNK1Q9H4A3 2382 aa12.81□□□□□ -0.36
SNRNP48-203ENST00000634363 IGKV1-9A0A0C4DH69 117 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SULT1B1O43704 296 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SYNGR1O43759 233 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 CYB5AP00167 134 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 CELP19835 753 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 MPZP25189 248 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 BDH1Q02338 343 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 IL24Q13007 206 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SPHARQ15513 63 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 MED22Q15528 200 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 YIF1BQ5BJH7 314 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 BTN2A1Q7KYR7 527 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SLC36A1Q7Z2H8 476 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 ANGPTL5Q86XS5 388 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 CALHM1Q8IU99 346 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 PARP16Q8N5Y8 322 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 POC1AQ8NBT0 407 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 FAM110DQ8TAY7 271 aaPredicted RBP12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 RGP1Q92546 391 aaPredicted RBP12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 TMEM106AQ96A25 262 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SEH1LQ96EE3 360 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 SNTG1Q9NSN8 517 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 RASL12Q9NYN1 266 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 NLKQ9UBE8 527 aa12.8□□□□□ -0.36
SNRNP48-203ENST00000634363 FAM96BQ9Y3D0 163 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms