RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PSMD7P51665 324 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 BTG1P62324 171 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 PLA2G7Q13093 441 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 PRDX4Q13162 271 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 CNN3Q15417 329 aaKnown RBP10.6□□□□□ -0.71
PNKP-217ENST00000625216 RAB11BQ15907 218 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 ZNF181Q2M3W8 571 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 DCAF12L2Q5VW00 463 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 PLCXD3Q63HM9 321 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 MZT2AQ6P582 158 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 MOB3CQ70IA8 216 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 MUC20Q8N307 709 aaPredicted RBP10.6□□□□□ -0.71
PNKP-217ENST00000625216 CELF2-AS1Q8N7Q2 184 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 CSNK2A3Q8NEV1 391 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 OR4D6Q8NGJ1 314 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 OR6M1Q8NGM8 313 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 HPSE2Q8WWQ2 592 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 ITFG2Q969R8 447 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 ERGIC1Q969X5 290 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 RFT1Q96AA3 541 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 PAPOLGQ9BWT3 736 aaKnown RBP10.6□□□□□ -0.71
PNKP-217ENST00000625216 CNTD2Q9H8S5 307 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 LIN7BQ9HAP6 207 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 PATZ1Q9HBE1 687 aaKnown RBP10.6□□□□□ -0.71
PNKP-217ENST00000625216 OR5V1Q9UGF6 321 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 STEAP1Q9UHE8 339 aa10.6□□□□□ -0.71
PNKP-217ENST00000625216 POLR3KQ9Y2Y1 108 aaPredicted RBP10.6□□□□□ -0.71
PNKP-217ENST00000625216 IGKV1-27A0A075B6S5 117 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 EIF4EP06730 217 aaKnown RBP10.59□□□□□ -0.71
PNKP-217ENST00000625216 CALCBP10092 127 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 HTR2CP28335 458 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 TNFSF8P32971 234 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 S100A5P33763 92 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 ZNF93P35789 620 aaPredicted RBP10.59□□□□□ -0.71
PNKP-217ENST00000625216 MDH2P40926 338 aaKnown RBP10.59□□□□□ -0.71
PNKP-217ENST00000625216 OR3A4PP47883 348 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 C1orf87Q8N0U7 546 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 OR51D1Q8NGF3 324 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 ZNF671Q8TAW3 534 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 SPSB1Q96BD6 273 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 FOXRED1Q96CU9 486 aaPredicted RBP10.59□□□□□ -0.71
PNKP-217ENST00000625216 SLC25A38Q96DW6 304 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 UQCC2Q9BRT2 126 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 C19orf24Q9BVV8 132 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 TMPRSS13Q9BYE2 586 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 DCAF16Q9NXF7 216 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 SPATA2Q9UM82 520 aa10.59□□□□□ -0.71
PNKP-217ENST00000625216 MLNRO43193 412 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 TMEM127O75204 238 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 ETV6P41212 452 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 GATA4P43694 442 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 POU3F4P49335 361 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 ZP1P60852 638 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 LCN2P80188 198 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 ZMYND11Q15326 602 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 C1orf229Q6ZS94 237 aaPredicted RBP10.58□□□□□ -0.72
PNKP-217ENST00000625216 C1QL2Q7Z5L3 287 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 CDH26Q8IXH8 852 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 ZDHHC23Q8IYP9 409 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 SAMD12Q8N8I0 201 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 OR10AD1Q8NGE0 317 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 OR5D18Q8NGL1 313 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
PNKP-217ENST00000625216 ZFAND2BQ8WV99 257 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 FAM3DQ96BQ1 224 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 C1orf147Q96MC9 270 aaPredicted RBP10.58□□□□□ -0.72
PNKP-217ENST00000625216 C7orf69Q9H7B7 122 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
PNKP-217ENST00000625216 V9GYH0 126 aa10.58□□□□□ -0.72
PNKP-217ENST00000625216 TMEM272A0A1B0GTI8 110 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 FAM230AA0A1W2PPH8 454 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 PQLC2LA1A4F0 135 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 ANKRD30BLA7E2S9 258 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 A8MXK9 166 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 F5H0A9 414 aaPredicted RBP10.57□□□□□ -0.72
PNKP-217ENST00000625216 F5H5P2 479 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 H0YL77 283 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 J3QRK9 145 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 LDLRAD4O15165 306 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 MAGEB3O15480 346 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 AVPP01185 164 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 WNT2P09544 360 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 OCMP0CE72 109 aaPredicted RBP10.57□□□□□ -0.72
PNKP-217ENST00000625216 IRF2P14316 349 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 ELK1P19419 428 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 PRKACBP22694 351 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 ZFP36P26651 326 aaKnown RBP10.57□□□□□ -0.72
PNKP-217ENST00000625216 CD200P41217 278 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 EFNB2P52799 333 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 KISS1Q15726 138 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 ESCO2Q56NI9 601 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 CNIH2Q6PI25 160 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 LHFPL2Q6ZUX7 228 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 SPERTQ8NA61 448 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms