RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 SSTP61278 116 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 FAM3AP98173 230 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 TMEM187Q14656 261 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 NAXEQ8NCW5 288 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 CACFD1Q9UGQ2 172 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
LINC00552-201ENST00000625151 EDARQ9UNE0 448 aa13.23□□□□□ -0.29
LINC00552-201ENST00000625151 TNFSF11O14788 317 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 VAMP5O95183 116 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 APOC1P02654 83 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 GLI4P10075 376 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 LIFP15018 202 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 FXYD4P59646 89 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 SWI5Q1ZZU3 235 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 TMEM105Q8N8V8 129 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 NAA60Q9H7X0 242 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 NECAP2Q9NVZ3 263 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 A0A0J9YW62 118 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 FAM221AA4D161 298 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 XRCC2O43543 280 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 DIRAS3O95661 229 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 ZNF728P0DKX0 622 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 PPT1P50897 306 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 LYZL2Q7Z4W2 148 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 SKA3Q8IX90 412 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
LINC00552-201ENST00000625151 SRXN1Q9BYN0 137 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 PLEKHA2Q9HB19 425 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 WFDC1Q9HC57 220 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 HSF4Q9ULV5 492 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 POMT1Q9Y6A1 747 aa13.22□□□□□ -0.29
LINC00552-201ENST00000625151 FREM2Q5SZK8 3169 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 PQLC2LA1A4F0 135 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 CHATP28329 748 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 EPHA8P29322 1005 aaPredicted RBP13.21□□□□□ -0.29
LINC00552-201ENST00000625151 DSCR4P56555 118 aaPredicted RBP13.21□□□□□ -0.29
LINC00552-201ENST00000625151 PIGYQ3MUY2 71 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 PHLDA2Q53GA4 152 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 FAM27BQ5VT28 67 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 ZNF774Q6NX45 483 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 SPSB1Q96BD6 273 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 NAA11Q9BSU3 229 aaPredicted RBP13.21□□□□□ -0.29
LINC00552-201ENST00000625151 ANGPTL4Q9BY76 406 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 NCKAP5O14513 1909 aa13.21□□□□□ -0.29
LINC00552-201ENST00000625151 E5RGE8 158 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 MASP2O00187 686 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 GEMIN2O14893 280 aaKnown RBP13.21□□□□□ -0.3
LINC00552-201ENST00000625151 SGCEO43556 437 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 SYNGR3O43761 229 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 NME2P1O60361 137 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 SUCLG1P53597 346 aaKnown RBP13.21□□□□□ -0.3
LINC00552-201ENST00000625151 MRPS34P82930 218 aaKnown RBP13.21□□□□□ -0.3
LINC00552-201ENST00000625151 ABCA11PQ4W5N1 156 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 MIDNQ504T8 468 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 CCDC54Q8NEL0 328 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 CLCC1Q96S66 551 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 ARV1Q9H2C2 271 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 DKKL1Q9UK85 242 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 ZDHHC8Q9ULC8 765 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 KCNIP3Q9Y2W7 256 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 NSG2Q9Y328 171 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 STARD10Q9Y365 291 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 TIMM10BQ9Y5J6 103 aa13.21□□□□□ -0.3
LINC00552-201ENST00000625151 IGHV1-45A0A0A0MS14 117 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 IGKV1-12A0A0C4DH73 117 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 LAMTOR5O43504 91 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 IGKV1D-12P01611 117 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 DTYMKP23919 212 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 NTF4P34130 210 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 FHITP49789 147 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
LINC00552-201ENST00000625151 C1orf210Q8IVY1 113 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 C14orf79Q96F83 325 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 GALNT14Q96FL9 552 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 RNF122Q9H9V4 155 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
LINC00552-201ENST00000625151 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 CCDC187A0A096LP49 1063 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 TSPAN15O95858 294 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 UMODP07911 640 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 PATE4P0C8F1 98 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 HOXA6P31267 233 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 SNCAP37840 140 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 RAB35Q15286 201 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 SLC22A25Q6T423 547 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 TMEM156Q8N614 296 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 OR52M1Q8NGK5 317 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 OR5L1Q8NGL2 311 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 SFT2D1Q8WV19 159 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 SCRT1Q9BWW7 348 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 SLC2A9Q9NRM0 540 aa13.2□□□□□ -0.3
LINC00552-201ENST00000625151 TERTO14746 1132 aaKnown RBP13.19□□□□□ -0.3
LINC00552-201ENST00000625151 ZNF616Q08AN1 781 aa13.19□□□□□ -0.3
LINC00552-201ENST00000625151 CDCP2Q5VXM1 449 aa13.19□□□□□ -0.3
LINC00552-201ENST00000625151 PMS2CLQ68D20 193 aa13.19□□□□□ -0.3
LINC00552-201ENST00000625151 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms