RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 BMXP51813 675 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 PROK1P58294 105 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 CNN3Q15417 329 aaKnown RBP13.97□□□□□ -0.17
HMGN3-203ENST00000620514 MIDNQ504T8 468 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 TMEM244Q5VVB8 128 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 DHRS7BQ6IAN0 325 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-203ENST00000620514 FDX2Q6P4F2 183 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 BRICD5Q6PL45 260 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 TREML4Q6UXN2 200 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 ZNF782Q6ZMW2 699 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-203ENST00000620514 KCTD20Q7Z5Y7 419 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 EGFL6Q8IUX8 553 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 ENTHD1Q8IYW4 607 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 PP6455Q8WZ26 134 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 FGGYQ96C11 551 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 C10orf35Q96D05 121 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 PELI1Q96FA3 418 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 CITED1Q99966 193 aa13.97□□□□□ -0.17
HMGN3-203ENST00000620514 EXOGQ9Y2C4 368 aaKnown RBP13.97□□□□□ -0.17
HMGN3-203ENST00000620514 A0A1W2PPH5 198 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 TMEM82A0PJX8 343 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 CHRM2P08172 466 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 HTR1AP08908 422 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 CALCBP10092 127 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 ATF1P18846 271 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 NPBWR2P48146 333 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 POU3F4P49335 361 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 ATP1B3P54709 279 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 DLX6P56179 175 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 ZNF91Q05481 1191 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 RNF144BQ7Z419 303 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 LHFPL3Q86UP9 236 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 ACBD7Q8N6N7 88 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 OR51A4Q8NGJ6 313 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 OR5R1Q8NH85 324 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 EMG1Q92979 244 aaKnown RBP13.96□□□□□ -0.17
HMGN3-203ENST00000620514 C4orf36Q96KX1 117 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 SSX3Q99909 188 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 PPA2Q9H2U2 334 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 HEXA-AS1Q9H8Q6 139 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 S100A14Q9HCY8 104 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 AMBNQ9NP70 447 aa13.96□□□□□ -0.17
HMGN3-203ENST00000620514 RBFOX1Q9NWB1 397 aaKnown RBP13.96□□□□□ -0.17
HMGN3-203ENST00000620514 OR4C45A6NMZ5 311 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 WIPF1O43516 503 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 CLPXO76031 633 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 ISG15P05161 165 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 DBTP11182 482 aaKnown RBP13.95□□□□□ -0.18
HMGN3-203ENST00000620514 ZNF20P17024 532 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 BCL3P20749 454 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 AZGP1P25311 298 aaKnown RBP13.95□□□□□ -0.18
HMGN3-203ENST00000620514 DUSP1P28562 367 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 RBP2P50120 134 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 EDDM3BP56851 147 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 LY6EQ16553 131 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 TCF23Q7RTU1 214 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 DNAAF1Q8NEP3 725 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 RFT1Q96AA3 541 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 C9orf16Q9BUW7 83 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 C16orf95Q9H693 158 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 MYRFQ9Y2G1 1151 aa13.95□□□□□ -0.18
HMGN3-203ENST00000620514 C17orf98A8MV24 154 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 TSPAN9O75954 239 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 HAND1O96004 215 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 IGHA1P01876 353 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 TGFBR2P37173 567 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 CCR9P51686 369 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 SNU13P55769 128 aaKnown RBP13.94□□□□□ -0.18
HMGN3-203ENST00000620514 MTCP1P56278 107 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 ALKBH1Q13686 389 aaKnown RBP13.94□□□□□ -0.18
HMGN3-203ENST00000620514 EDDM3AQ14507 147 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 UTS2BQ765I0 119 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 GDPD3Q7L5L3 318 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 LHFPL4Q7Z7J7 247 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 OR8H2Q8N162 312 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 OR52N4Q8NGI2 321 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 RHOXF1Q8NHV9 184 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 SNX22Q96L94 193 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 SPACA5Q96QH8 159 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 ALG8Q9BVK2 526 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 MEGF9Q9H1U4 602 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 ISG20L2Q9H9L3 353 aaKnown RBP13.94□□□□□ -0.18
HMGN3-203ENST00000620514 HHLA2Q9UM44 414 aa13.94□□□□□ -0.18
HMGN3-203ENST00000620514 TRBV2A0A0J9YWF9 115 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 hCG_1809904A0A1W2PP81 198 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 A0A1W2PPE2 198 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 A0A1W2PR64 198 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 A0A1W2PRV1 198 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 SNTNA6NMZ2 147 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 PRKACBP22694 351 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 ACTA2P62736 377 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 ACTG2P63267 376 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 GALEQ14376 348 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 LRRC75BQ2VPJ9 315 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 SLC35E4Q6ICL7 350 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 ZBTB49Q6ZSB9 765 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 C10orf67Q8IYJ2 551 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 DYNAPQ8N1N2 210 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 PQLC1Q8N2U9 271 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms