RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 BOD1Q96IK1 185 aa11.36□□□□□ -0.59
SKP2-209ENST00000620197 TPSD1Q9BZJ3 242 aa11.36□□□□□ -0.59
SKP2-209ENST00000620197 POLR1DQ9Y2S0 133 aa11.36□□□□□ -0.59
SKP2-209ENST00000620197 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SYNGR3O43761 229 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 OR2J2O76002 312 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SULT1A1P50225 295 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SHBQ15464 509 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 DMRTC1Q5HYR2 192 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SPSB3Q6PJ21 355 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 CPEB2Q7Z5Q1 589 aaKnown RBP11.35□□□□□ -0.59
SKP2-209ENST00000620197 Q8NFD4 153 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SPACA9Q96E40 222 aaPredicted RBP11.35□□□□□ -0.59
SKP2-209ENST00000620197 TCEAL7Q9BRU2 100 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 LUZP4Q9P127 313 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 MTCH2Q9Y6C9 303 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 ASXL3Q9C0F0 2248 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 TSPAN15O95858 294 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 FBP1P09467 338 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 PPM1FP49593 454 aaPredicted RBP11.35□□□□□ -0.59
SKP2-209ENST00000620197 EXT1Q16394 746 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 RASL10BQ96S79 203 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 FAAP24Q9BTP7 215 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 ZNF160Q9HCG1 818 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 SLC2A9Q9NRM0 540 aa11.35□□□□□ -0.59
SKP2-209ENST00000620197 A0A087WZY1 265 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 IGKV1-12A0A0C4DH73 117 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 IFNA21P01568 189 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 IGKV1D-12P01611 117 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 S100A9P06702 114 aaKnown RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 ARL4DP49703 201 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 RPS23P62266 143 aaKnown RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 DEFB119Q8N690 84 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 NME2P1O60361 137 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 S100A6P06703 90 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 NQO2P16083 231 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 HTR5AP47898 357 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 HIKESHIQ53FT3 197 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 OR1J1Q8NGS3 322 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 PARP12Q9H0J9 701 aaKnown RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 ZNF701Q9NV72 531 aaPredicted RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 NDUFS6O75380 124 aaKnown RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 SNRNP70P08621 437 aaKnown RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 NR2C1P13056 603 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 HAAOP46952 286 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 RRADP55042 308 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 CLDN17P56750 224 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 RAB1AP62820 205 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 OR8B8Q15620 311 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 SRSF7Q16629 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKP2-209ENST00000620197 LCN10Q6JVE6 187 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 CLEC9AQ6UXN8 241 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 TSTD1Q8NFU3 115 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 OR10AD1Q8NGE0 317 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 NPRL2Q8WTW4 380 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 RTN4IP1Q8WWV3 396 aaPredicted RBP11.34□□□□□ -0.59
SKP2-209ENST00000620197 PIGTQ969N2 578 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 MUCL1Q96DR8 90 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 SMIM3Q9BZL3 60 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 SPACA1Q9HBV2 294 aa11.34□□□□□ -0.59
SKP2-209ENST00000620197 TNRC6AQ8NDV7 1962 aaKnown RBP11.33□□□□□ -0.59
SKP2-209ENST00000620197 OR6C6A6NF89 314 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 ZFAND5O76080 213 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 OPN1LWP04000 364 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 DBHP09172 617 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 ZNF728P0DKX0 622 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 FOXRED2Q8IWF2 684 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 ZNF385AQ96PM9 386 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 A0A087WWC5 75 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 LOC102723996A0A087X1L8 192 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 NSG1A0A0A6YYJ2 146 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 LY6G6EA0A0G2JKS1 128 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 M0R135 149 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 AP4M1O00189 453 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 TMEM225BP0DP42 221 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 DUSP1P28562 367 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 EIF2S3P41091 472 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 MRPS34P82930 218 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 ZNF799Q96GE5 643 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 U3KQA8 63 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 COL27A1Q8IZC6 1860 aaPredicted RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 UMAD1C9J7I0 102 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 RPL36A-HNRNPH2H7BZ11 118 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 YKT6O15498 198 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 C1QL1O75973 258 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms