RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CDKN1BP46527 198 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 CNN3Q15417 329 aaKnown RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 TMEM176BQ3YBM2 270 aaPredicted RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 FBXW9Q5XUX1 488 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 LYG1Q8N1E2 194 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 TMEM256Q8N2U0 113 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 C12orf76Q8N812 135 aaPredicted RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 BADQ92934 168 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 APH1AQ96BI3 265 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 SDF2Q99470 211 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 DOCK11Q5JSL3 2073 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 CXCR1P25024 350 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 APOBEC1P41238 236 aaKnown RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 DUSP3P51452 185 aaPredicted RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 GNMTQ14749 295 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 LINC01555Q8NAE3 123 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 RLN3Q8WXF3 142 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 ATP5SQ99766 215 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 KLHL13Q9P2N7 655 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 EMC9Q9Y3B6 208 aa10.85□□□□□ -0.67
MATR3-227ENST00000618441 PDCD11Q14690 1871 aaKnown RBP10.85□□□□□ -0.67
MATR3-227ENST00000618441 NPIPA2E9PIF3 369 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 UPK3AO75631 287 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 RAB28P51157 221 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 POLR2LP62875 67 aaKnown RBP10.84□□□□□ -0.67
MATR3-227ENST00000618441 HIST1H3AP68431 136 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 RIPPLY2Q5TAB7 128 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 CNKSR3Q6P9H4 555 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 MRGPRFQ96AM1 343 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 HELZP42694 1942 aaKnown RBP10.84□□□□□ -0.67
MATR3-227ENST00000618441 P2RY10O00398 339 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 IGLV3-27P01718 113 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 NGFRP08138 427 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 CDKN3Q16667 212 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 OR52N4Q8NGI2 321 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 FGGYQ96C11 551 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 C1orf123Q9NWV4 160 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 TRBV6-7A0A0A0MS04 114 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 GABRR1P24046 479 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 GALR1P47211 349 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 FAM3BP58499 235 aaPredicted RBP10.84□□□□□ -0.67
MATR3-227ENST00000618441 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 DCST2Q5T1A1 773 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
MATR3-227ENST00000618441 GRINAQ7Z429 371 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 POC1AQ8NBT0 407 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 OR5L2Q8NGL0 311 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 SCGB3A2Q96PL1 93 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 YIPF1Q9Y548 306 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
MATR3-227ENST00000618441 RPL36A-HNRNPH2H7BZ11 118 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 SEC11BP0C7V7 166 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 HLA-GP17693 338 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 HNRNPA1L2Q32P51 320 aaKnown RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 C16orf82Q7Z2V1 217 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 STPG4Q8N801 248 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 ZNF461Q8TAF7 563 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 CYB5D2Q8WUJ1 264 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 RNF2Q99496 336 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 ZFYVE21Q9BQ24 234 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 SMIM7Q9BQ49 75 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 H7C4K7 107 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 KLF3P57682 345 aaPredicted RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 SSBP1Q04837 148 aaKnown RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 SRSF4Q08170 494 aaKnown RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 TMEM230Q96A57 120 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 ANKRD9Q96BM1 317 aaPredicted RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 FER1L6-AS2Q96M78 137 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 MIEN1Q9BRT3 115 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 TMEM9BQ9NQ34 198 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 LSM7Q9UK45 103 aaKnown RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 SNRNP200O75643 2136 aaKnown RBP10.83□□□□□ -0.68
MATR3-227ENST00000618441 H3BP45 60 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 HCRTR2O43614 444 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 C4orf45Q96LM5 186 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 HSPB9Q9BQS6 159 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 PCBD2Q9H0N5 130 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 PTPRDP23468 1912 aa10.83□□□□□ -0.68
MATR3-227ENST00000618441 NKX6-3A6NJ46 265 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 TBX19O60806 448 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 HIST1H1TP22492 207 aaPredicted RBP10.82□□□□□ -0.68
MATR3-227ENST00000618441 FPR2P25090 351 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 RPS4XP62701 263 aaKnown RBP10.82□□□□□ -0.68
MATR3-227ENST00000618441 SPEM2Q0P670 501 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 DNLZQ5SXM8 178 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 OR10S1Q8NGN2 331 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 CNTD2Q9H8S5 307 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 VAX2Q9UIW0 290 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
MATR3-227ENST00000618441 K7ESM1 405 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 NUDT14O95848 222 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 RENP00797 406 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 DEFB134Q4QY38 66 aa10.82□□□□□ -0.68
MATR3-227ENST00000618441 ALG10Q5BKT4 473 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms