RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-220ENST00000615665 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-220ENST00000615665 SIGLEC14Q08ET2 396 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 RALGAPA1Q6GYQ0 2036 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 SLC22A20A6NK97 555 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 SLC25A4P12235 298 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 CHATP28329 748 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 PPP1R35Q8TAP8 253 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 MS4A7Q9GZW8 240 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-220ENST00000615665 TMEM9BQ9NQ34 198 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-220ENST00000615665 TMEM14DPA8MWL7 114 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 K7ESF4 209 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 MASP2O00187 686 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-220ENST00000615665 CTSDP07339 412 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-220ENST00000615665 NMBP08949 121 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 CD80P33681 288 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 PRDX4Q13162 271 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 PIK3IP1Q96FE7 263 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 PLK3Q9H4B4 646 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 OPA3Q9H6K4 179 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 COL4A3Q01955 1670 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 CENPFP49454 3210 aa12.3□□□□□ -0.44
SSBP2-220ENST00000615665 RNF212BA8MTL3 300 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 PDGFBP01127 241 aaPredicted RBP12.29□□□□□ -0.44
SSBP2-220ENST00000615665 CCL2P13500 99 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 ZNF345Q14585 488 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 FAM185AQ8N0U4 392 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 BVESQ8NE79 360 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 B3GAT1Q9P2W7 334 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 POLDIP2Q9Y2S7 368 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 NDUFA6P56556 154 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 UNC119Q13432 240 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 RNPS1Q15287 305 aaKnown RBP12.29□□□□□ -0.44
SSBP2-220ENST00000615665 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 GGNBP1Q5YKI7 109 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 GEMIN2O14893 280 aaKnown RBP12.29□□□□□ -0.44
SSBP2-220ENST00000615665 EFSO43281 561 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 MEOX1P50221 254 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 HMGN3Q15651 99 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 UQCC3Q6UW78 93 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
SSBP2-220ENST00000615665 NAA60Q9H7X0 242 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 CACNA1EQ15878 2313 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 EDN3P14138 238 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 MZT1Q08AG7 82 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 BPIFCQ8NFQ6 507 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 SGK3Q96BR1 496 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 ENY2Q9NPA8 101 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 PIPOXQ9P0Z9 390 aa12.29□□□□□ -0.44
SSBP2-220ENST00000615665 IGHV3-64DA0A0J9YX35 117 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 NME2P1O60361 137 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 TUSC2O75896 110 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 PRF1P14222 555 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 OR1S2Q8NGQ3 325 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 OR5B12Q96R08 314 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 CEP350Q5VT06 3117 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 TRAV20A0A0B4J274 112 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
SSBP2-220ENST00000615665 MSMO1Q15800 293 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 SPATA46Q5T0L3 261 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 ZNF660Q6AZW8 331 aaPredicted RBP12.28□□□□□ -0.44
SSBP2-220ENST00000615665 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
SSBP2-220ENST00000615665 GPR87Q9BY21 358 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 MRPL13Q9BYD1 178 aaKnown RBP12.28□□□□□ -0.44
SSBP2-220ENST00000615665 SLC2A8Q9NY64 477 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 TRGV5A0A0B4J1U4 118 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 SMCO3A2RU48 225 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 GDF9O60383 454 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 CST4P01036 141 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 OR5AC1P0C628 307 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 OR13C7P0DN81 318 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 VASH2Q86V25 355 aa12.28□□□□□ -0.44
SSBP2-220ENST00000615665 NUDT16L1Q9BRJ7 211 aaKnown RBP12.28□□□□□ -0.44
SSBP2-220ENST00000615665 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
SSBP2-220ENST00000615665 CACNA1GO43497 2377 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 VSTM5A8MXK1 200 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 SIRPB1O00241 398 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 MECP2P51608 486 aaKnown RBP12.27□□□□□ -0.44
SSBP2-220ENST00000615665 F2RL1P55085 397 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 CATR1Q13166 79 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 OR8G1Q15617 311 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 TUSC5Q8IXB3 177 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 OR2G3Q8NGZ4 309 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 MPDZO75970 2070 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 MED12Q93074 2177 aa12.27□□□□□ -0.44
SSBP2-220ENST00000615665 LRP5LA4QPB2 252 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 SSSCA1O60232 199 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 GLAP06280 429 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 RAB4BP61018 213 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 TMEM182Q6ZP80 229 aaPredicted RBP12.27□□□□□ -0.45
SSBP2-220ENST00000615665 SLC25A28Q96A46 364 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 WDR13Q9H1Z4 485 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.45
SSBP2-220ENST00000615665 GPR132Q9UNW8 380 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms