RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 MFFQ9GZY8 342 aa9.1□□□□□ -0.95
LINC01001-203ENST00000607448 IFT46Q9NQC8 304 aa9.1□□□□□ -0.95
LINC01001-203ENST00000607448 SLC7A10Q9NS82 523 aa9.1□□□□□ -0.95
LINC01001-203ENST00000607448 ZNF224Q9NZL3 707 aa9.1□□□□□ -0.95
LINC01001-203ENST00000607448 COMMD9Q9P000 198 aa9.1□□□□□ -0.95
LINC01001-203ENST00000607448 ARID1AO14497 2285 aa9.1□□□□□ -0.95
LINC01001-203ENST00000607448 HEATR1Q9H583 2144 aaKnown RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 TMEM235A6NFC5 223 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 DPRXA6NFQ7 191 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 MFSD2BA6NFX1 497 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 TMEM14DPA8MWL7 114 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 EIF1BO60739 113 aaKnown RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR2F2O95006 317 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 NMBP08949 121 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 CD99P14209 185 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 MGMTP16455 207 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 UBE2MP61081 183 aaKnown RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 DHRS2Q13268 280 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR2F1Q13607 317 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 ZNF345Q14585 488 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 PNLIPRP3Q17RR3 467 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 MOGAT2Q3SYC2 334 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 CDNFQ49AH0 187 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 CORO6Q6QEF8 472 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 DOK3Q7L591 496 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 TMED4Q7Z7H5 227 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 WDFY1Q8IWB7 410 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 PAQR4Q8N4S7 273 aaPredicted RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 CCDC54Q8NEL0 328 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR9K2Q8NGE7 335 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR52N4Q8NGI2 321 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR13C8Q8NGS7 320 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 OR10R2Q8NGX6 335 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 ADAT3Q96EY9 351 aaPredicted RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 BEX4Q9NWD9 120 aaPredicted RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 SDHAF2Q9NX18 166 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 ANAPC10Q9UM13 185 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 EDARQ9UNE0 448 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 TMA7Q9Y2S6 64 aaKnown RBP9.09□□□□□ -0.95
LINC01001-203ENST00000607448 LHFPL6Q9Y693 200 aa9.09□□□□□ -0.95
LINC01001-203ENST00000607448 ZSCAN5BA6NJL1 495 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 OR5H1A6NKK0 313 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF726A6NNF4 738 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 KRBOX1C9JBD0 128 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 LMX1BO60663 402 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 VSIG8P0DPA2 414 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF43P17038 809 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 NAT1P18440 290 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ZBTB25P24278 435 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 MPGP29372 298 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF93P35789 620 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 CBX5P45973 191 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 LSM6P62312 80 aaKnown RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 NKX6-1P78426 367 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 UNC119Q13432 240 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 PPA1Q15181 289 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 GABRA6Q16445 453 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 HIST3H3Q16695 136 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 SCGB2B2Q4G0G5 96 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 LY6G6FQ5SQ64 297 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 AWAT2Q6E213 333 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 OR10K2Q6IF99 312 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ADAM5Q6NVV9 412 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 HSD17B13Q7Z5P4 300 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 PDZD9Q8IXQ8 264 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 EIF4E3Q8N5X7 224 aaKnown RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 CHST4Q8NCG5 386 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 KCNG3Q8TAE7 436 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 WDR89Q96FK6 387 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 PERPQ96FX8 193 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 SMR3AQ99954 134 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 NAA11Q9BSU3 229 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 EMC6Q9BV81 110 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 SETD2Q9BYW2 2564 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 REG4Q9BYZ8 158 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 GSX1Q9H4S2 264 aaPredicted RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 NOP16Q9Y3C1 178 aaKnown RBP9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ALPK2Q86TB3 2170 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
LINC01001-203ENST00000607448 HS3ST1O14792 307 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 CNOT4O95628 575 aaKnown RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 IFNA6P05013 189 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 TIMM23BQ5SRD1 257 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 C20orf204Q6ZNR8 217 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 CFAP77Q6ZQR2 320 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OVCH2Q7RTZ1 564 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 KCNRGQ8N5I3 272 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OR13C9Q8NGT0 318 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OR51E1Q8TCB6 317 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 MITD1Q8WV92 249 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 TMEM45BQ96B21 275 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SCGB3A2Q96PL1 93 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 PHB2Q99623 299 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 NARFLQ9H6Q4 476 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SEC61A2Q9H9S3 476 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 GLS2Q9UI32 602 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms