RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PAAF1Q9BRP4 392 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ALG12Q9BV10 488 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC46A2Q9BY10 475 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 C11orf1Q9H5F2 150 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 WDR76Q9H967 626 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 DNAJC4Q9NNZ3 241 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 CBLN4Q9NTU7 201 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 C1orf123Q9NWV4 160 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 CISD1Q9NZ45 108 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 NAGKQ9UJ70 344 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PADI1Q9ULC6 663 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC45A2Q9UMX9 530 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 GPR34Q9UPC5 381 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MSRB2Q9Y3D2 182 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 INSL6Q9Y581 213 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 IER3IP1Q9Y5U9 82 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 WSB1Q9Y6I7 421 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 FANCMQ8IYD8 2048 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 PAPPA2Q9BXP8 1791 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A087WV62 115 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 IGHV2-70DA0A0C4DH43 119 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 LOC102723971A0A1B0GUV8 181 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM230AA0A1W2PPH8 454 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A1W2PR48 441 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 MEIS3P1A6NDR6 274 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF840PA6NDX5 716 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR6C6A6NF89 314 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF860A6NHJ4 632 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CASTOR2A6NHX0 329 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC38A8A6NNN8 435 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM14DPA8MWL7 114 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM238C9JI98 176 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 NPIPA2E9PIF3 369 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 H0YL77 283 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CCL25O15444 150 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 RRP8O43159 456 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FRS3O43559 492 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 LATO43561 262 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TSPAN6O43657 245 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 NME2P1O60361 137 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 PIAS2O75928 621 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 LCATP04180 440 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 GYPBP06028 91 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CTSDP07339 412 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 AKR1A1P14550 325 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FOSL2P15408 326 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SELEP16581 610 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FUT1P19526 365 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CHRNB4P30926 498 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CORO1AP31146 461 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 GDI1P31150 447 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 HRH1P35367 487 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SRP14P37108 136 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 NAA10P41227 235 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ACAA2P42765 397 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SOX2P48431 317 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 RAB7AP51149 207 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 PTTG1IPP53801 180 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRKAG1P54619 331 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 LCN2P80188 198 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPS6P82932 125 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 RHOGP84095 191 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF92Q03936 586 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF616Q08AN1 781 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 IL24Q13007 206 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR5I1Q13606 314 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 EIF2B1Q14232 305 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF266Q14584 549 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC17A1Q14916 467 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ARL6IP1Q15041 203 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 NSDHLQ15738 373 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 PCK2Q16822 640 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ODF4Q2M2E3 257 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRIM61Q5EBN2 209 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 GLYATL3Q5SZD4 288 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 C1QL3Q5VWW1 255 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM90A2PQ658T7 463 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 RTL6Q6ICC9 239 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 VWA1Q6PCB0 445 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM220Q6QAJ8 160 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 C16orf54Q6UWD8 224 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 Q6YL49 198 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF705AQ6ZN79 300 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OLIG3Q7RTU3 272 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF550Q7Z398 422 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRAPPC6BQ86SZ2 158 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 MYPOPQ86VE0 399 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 LYG1Q8N1E2 194 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 C11orf42Q8N5U0 333 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR51L1Q8NGJ5 315 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR51G1Q8NGK1 321 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR4D5Q8NGN0 318 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR4K13Q8NH42 304 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR51A7Q8NH64 312 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLDND2Q8NHS1 167 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 WFIKKN2Q8TEU8 576 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNRF4Q8WWF5 429 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 ERGIC1Q969X5 290 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CTHRC1Q96CG8 243 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms